| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_2771 |
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| Symbol | |
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| ID | 4286202 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Maricaulis maris MCS10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008347 |
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| Strand | - |
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| Start bp | 3053668 |
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| End bp | 3055728 |
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| Gene Length | 2061 bp |
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| Protein Length | 686 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638142266 |
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| Product | general secretion pathway protein D |
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| Protein accession | YP_757991 |
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| Protein GI | 114571311 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | [TIGR02517] general secretion pathway protein D |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.662007 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCACAGC GTTTTGTTTT AACCAGCTTG GTGTGCGGAG GGCTTTTGCT CACGCTGCAG
GCGTGCGCGC AACTCATGCC GGATGCCGCT GGCGTGCACG CAGGACGATT CCCTGCCACG
ACCCTCCCGG CCGATGACTC TGTCGCGGCT GCGACGGGCA CCGATGCGCC GGGTGCGCAG
CCTCCGGCGT CCACGGTGGA TGCGCAGGCT CCGATCGAAC AGGAGCGCTT GGTTTATTTT
GATGCGCGTG ACGGGTCTCG GCTCAGCCAG TCACCCAACC GCGCGGATCT CGACAGCCGG
ACCTTGCGCC TGAACTTCGT TGATGTGCCG GTCGCTGACG TCGTTCGGAC CATTGTCGGC
GACGCGCTGG GCCAGACAGT GATGGTGGCC GACGGGGTCA CCGGCCGTAT TTCGCTGACA
TCTGCCGAGC CGGCGCCTGC CCGTGCCGCA CTCGCGGCGC TTGAGACGGT GCTGGGTGAA
TCCAATCTCG TCCTTGCCGA GCGCGCAGAG GGCTACCTGC TGACCCGGCT GGATATGGCG
CGTCCGGGGC TGACCGGACT GTCGTCGGAG CTGGGCTATG GCGGCCGCGT TGTGCCGGTC
ACTCACACGA CACCGAGCGC GATTGTGTCC CTGATTGACC CCTTCCTGTC GGACCGGGTC
GAGGTCGTGC CGCATGATGC GCTGGGAGTA CTGGTGCTGG CTGGACCAGG GCCGGATGTC
GATGGCGCCC GGAGAGCGGC CATTCTCTTT GATCGCCCCT TCCTGACCGA TCGCGTCTTT
GGCATGTTCG AGCTGCGCTA TGTCTCGGCC GAAACGGCGA AGAGTGAAGT CGATACGGTG
CTGTCCGGAA CCGGCATGTC GATTGATGCC ATCCAGACCA TTGCCATGCC GCGCCTCAAC
ATGCTGCTGG TGACCGCACG CGACCGCAGC CAGTTCGAGC AGGCGCAGGT CTGGATCGAG
CGGCTGGACC GACCATCAGC AGGTTCCGAG CGGCGATTGC GCTATTATGT GGTTCGCAAC
ACACCCGCCT CTACATTGGC CACGCAGATC ACAGCCGCTT TTGCCGGTGG CCAGACCGGG
GCCGGGCAAT TGATCGAGCC GCGCTTTCAG GGTGATGACG CACACGGGGA GCCCAGTGCC
CCGGGTGAGG AACAGAGTCG GCTCACTATC ATCCCGGACG AGCTCAATAA CGCCTTGATC
ATCCGGGCGA CGGATCAGGA ATATCGCGAG ATCCTTGACC TCGTTCAGCG CATGGATGTC
ATGCCGCCGC AGGTTCTCAT CGAAGCGACA ATTGCCGAAG TTCGTCTTGA AGATGGCCTC
GATTTCGGTG TTCGTTGGTA TTTCGAGAAC GCCGGATCGA ACGAGACATC AAGCCTGCAA
TTCTCCGATT CCAACACGGG TTCCACAGCT CCCGTCTTCC CGGGCTTCAA TTATGCCTTC
TCCGGCACCG ACCTGACGGC GACGCTCAGC GCGCTGCGGT CGATCACGGA TGTGACGGTG
CTTTCGGCGC CTTCCATCAT GGTCCAGAAC AATCAGACGG CTCACCTGCA GGTCGGTGAT
GAAGTGCCAA TCGTGACCCA GACCGCGACC TCCGTAACCG AGAGCAATGC GCCAATCGTG
TCGTCCGTCG AGTTGCGGGA AACCGGGGTG ATCTTGCAAG TCACCCCGCG TATCAATGCC
AGTGGCATGG TGGTGCTCGA GGTCAATCAG GAAGTCTCGA GTGTGCGTCC GACAACAACG
TCGGGAATCG ACTCGCCGAC AATCCAGAAG CTCGAGTTCA CCAGTACTGT CTCGGTGCGG
AGCTCGAATA CGATCGCCCT GGGCGGGCTG ATCCGGGAAA CAACCTCGGA CAATGAATCG
CGCACGCCCC TACTCGGAGA CATCCCAGGC GTGGGCAATC TATTCCGGAA CCGAGCTATG
ACCAGTCAGC GCAGCGAGCT GGTCATTTTC CTTACACCTC GCATCATCTG GACCGATGAT
GATGTCGGGA GCGCCCTCAC GCATGTGCGC CGCCAGTTTG AAGCCCTGGA GGCCCGACAG
CCCGGCCTCT TCGACAATTG A
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| Protein sequence | MSQRFVLTSL VCGGLLLTLQ ACAQLMPDAA GVHAGRFPAT TLPADDSVAA ATGTDAPGAQ
PPASTVDAQA PIEQERLVYF DARDGSRLSQ SPNRADLDSR TLRLNFVDVP VADVVRTIVG
DALGQTVMVA DGVTGRISLT SAEPAPARAA LAALETVLGE SNLVLAERAE GYLLTRLDMA
RPGLTGLSSE LGYGGRVVPV THTTPSAIVS LIDPFLSDRV EVVPHDALGV LVLAGPGPDV
DGARRAAILF DRPFLTDRVF GMFELRYVSA ETAKSEVDTV LSGTGMSIDA IQTIAMPRLN
MLLVTARDRS QFEQAQVWIE RLDRPSAGSE RRLRYYVVRN TPASTLATQI TAAFAGGQTG
AGQLIEPRFQ GDDAHGEPSA PGEEQSRLTI IPDELNNALI IRATDQEYRE ILDLVQRMDV
MPPQVLIEAT IAEVRLEDGL DFGVRWYFEN AGSNETSSLQ FSDSNTGSTA PVFPGFNYAF
SGTDLTATLS ALRSITDVTV LSAPSIMVQN NQTAHLQVGD EVPIVTQTAT SVTESNAPIV
SSVELRETGV ILQVTPRINA SGMVVLEVNQ EVSSVRPTTT SGIDSPTIQK LEFTSTVSVR
SSNTIALGGL IRETTSDNES RTPLLGDIPG VGNLFRNRAM TSQRSELVIF LTPRIIWTDD
DVGSALTHVR RQFEALEARQ PGLFDN
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