Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmar10_2648 |
Symbol | |
ID | 4285979 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Maricaulis maris MCS10 |
Kingdom | Bacteria |
Replicon accession | NC_008347 |
Strand | - |
Start bp | 2884688 |
End bp | 2886292 |
Gene Length | 1605 bp |
Protein Length | 534 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638142147 |
Product | choline/carnitine/betaine transporter |
Protein accession | YP_757872 |
Protein GI | 114571192 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1292] Choline-glycine betaine transporter |
TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAGAC GCCTCTACAA GACCGATCAT GAAATCGGGC AGGACAATAT CTCCGTTCTC GGACTCGATG TTCACAATCC CGTCTTCTTC ATCTCTGCCG TTATCATGAT CGGCTTCGTG ACTGCGGCAG TGCTTATGCC GGAAGCCGTG TCGGCAGCCC TTTTTGCGGC CCGGGACTGG GTCTTGGCGA CCTTCGACTG GTTCTTCGTG CTCGGGGTCA ATCTGGTCTT TCTGTTCTGC CTGGTCGTGA TGGTGTCCCC GCTTGGCAAG CTGCGCATTG GCGGCAGTGC GGCCAAACCG GATTTCTCGA CCCGGTCATG GCTGGCCATG CTGTTCTCGG CGGGTATCGG CATCGGCCTG ATGTTCTGGG GGGCGGCGGA GCCCTTGGCC TATCATACCG AGTGGTTCGG CACGCCTTTG GGCGTTGAGC CCGGTACCGA CGCATCGGCC CGGCTGGCCC TTAGCGCGAC CATGTTCCAT TGGGGCCTGA ATGCCTGGTC GATCTATGCC GTCCTCGGAC TGGCGCTGGC CTATTTCACC TTCTCCAAAG GCCTGCCGCT GACGGTGCGC TCGGCCTTCT ACCCGCTTTT GGGTGAACGG ATCTGGGGCT GGCCGGGGCA TCTGATTGAT CTCCTCGCGG TGGTCGCAAC CCTGTTCGGA CTGGCGACAT CACTGGGACT GGGCGCGCAA CAGGTCGCCA GTGGTCTCGA CTTCCTGTTC GGGATCGACC CGGGCATCCT GACCCAGGTC ATCGTCATCG GCTGCATCAC CTCCATCGCG ATCGTGTCGG TGGTGCGCGG TCTGGATGGC GGCGTGAAGG TGTTGTCCAA CATCAACATG GTCATGGCCG GCATCTTCCT GCTGTTCATC TTCATCGTCG GGCCGACGCT GCTGATCGCC AACGGATTCT GGGAGAACAC GGTCGACTAT GTCCGCGATT TCCTGCCACT GGCCAACTGG ATCGGGCGTG AAGACACCGA ATGGTTCCAT GGCTGGACGG TGTTCTACTG GGCCTGGTGG GTCTCCTGGT CGCCCTTTGT CGGCATGTTC ATCGCACGGG TGTCCAAGGG GCGGACTGTC CGCGAATTCC TGGTCGCCGT GATCTTCGTG CCGATGCTGA TCACGATTGT CTGGTTCTCG ACTTTCGGCG AGACCGCGAT CTTCCAGTAC GAAAACGGTA TCGGCGAGCT GGCTGATGGA GTCGGCGAGG TGTCCCTTGT GTTGTTCCAG ATGTTGGACC ACCTGCCGTT TGCCGCCATC ACGTCCTTTA TCGCCATAAT CCTGGTCTTT GTGTTCTTCG TGACCTCGTC CGATTCCGGC TCACTGGTGA TCGACTCGAT CACCGCTGGT GGCAAGCTGC ACGCTCCGGT GCCGCAACGC ATTTTCTGGG CCTCGATCGA GGGGCTGGTC GCGGCGGTGC TGCTCTATGG CGGCGGTGCC CAGGCCCTGC AGGGTTTGCA GGCCGGCGCG ATCACGGCCG GTCTGCCCTT CATGGTCGTG CTTCTGGTGT GCTGTTACAG CCTCTGGAAG GGGTTGTGGT CGGATTTGCG GGCCCAAAGG GCATTGGACG CGGCACAGTC CAAGCCGGCC GAGGCGGAAG GCTAG
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Protein sequence | MTRRLYKTDH EIGQDNISVL GLDVHNPVFF ISAVIMIGFV TAAVLMPEAV SAALFAARDW VLATFDWFFV LGVNLVFLFC LVVMVSPLGK LRIGGSAAKP DFSTRSWLAM LFSAGIGIGL MFWGAAEPLA YHTEWFGTPL GVEPGTDASA RLALSATMFH WGLNAWSIYA VLGLALAYFT FSKGLPLTVR SAFYPLLGER IWGWPGHLID LLAVVATLFG LATSLGLGAQ QVASGLDFLF GIDPGILTQV IVIGCITSIA IVSVVRGLDG GVKVLSNINM VMAGIFLLFI FIVGPTLLIA NGFWENTVDY VRDFLPLANW IGREDTEWFH GWTVFYWAWW VSWSPFVGMF IARVSKGRTV REFLVAVIFV PMLITIVWFS TFGETAIFQY ENGIGELADG VGEVSLVLFQ MLDHLPFAAI TSFIAIILVF VFFVTSSDSG SLVIDSITAG GKLHAPVPQR IFWASIEGLV AAVLLYGGGA QALQGLQAGA ITAGLPFMVV LLVCCYSLWK GLWSDLRAQR ALDAAQSKPA EAEG
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