Gene Mmar10_2648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmar10_2648 
Symbol 
ID4285979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMaricaulis maris MCS10 
KingdomBacteria 
Replicon accessionNC_008347 
Strand
Start bp2884688 
End bp2886292 
Gene Length1605 bp 
Protein Length534 aa 
Translation table11 
GC content61% 
IMG OID638142147 
Productcholine/carnitine/betaine transporter 
Protein accessionYP_757872 
Protein GI114571192 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1292] Choline-glycine betaine transporter 
TIGRFAM ID[TIGR00842] choline/carnitine/betaine transport 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGAC GCCTCTACAA GACCGATCAT GAAATCGGGC AGGACAATAT CTCCGTTCTC 
GGACTCGATG TTCACAATCC CGTCTTCTTC ATCTCTGCCG TTATCATGAT CGGCTTCGTG
ACTGCGGCAG TGCTTATGCC GGAAGCCGTG TCGGCAGCCC TTTTTGCGGC CCGGGACTGG
GTCTTGGCGA CCTTCGACTG GTTCTTCGTG CTCGGGGTCA ATCTGGTCTT TCTGTTCTGC
CTGGTCGTGA TGGTGTCCCC GCTTGGCAAG CTGCGCATTG GCGGCAGTGC GGCCAAACCG
GATTTCTCGA CCCGGTCATG GCTGGCCATG CTGTTCTCGG CGGGTATCGG CATCGGCCTG
ATGTTCTGGG GGGCGGCGGA GCCCTTGGCC TATCATACCG AGTGGTTCGG CACGCCTTTG
GGCGTTGAGC CCGGTACCGA CGCATCGGCC CGGCTGGCCC TTAGCGCGAC CATGTTCCAT
TGGGGCCTGA ATGCCTGGTC GATCTATGCC GTCCTCGGAC TGGCGCTGGC CTATTTCACC
TTCTCCAAAG GCCTGCCGCT GACGGTGCGC TCGGCCTTCT ACCCGCTTTT GGGTGAACGG
ATCTGGGGCT GGCCGGGGCA TCTGATTGAT CTCCTCGCGG TGGTCGCAAC CCTGTTCGGA
CTGGCGACAT CACTGGGACT GGGCGCGCAA CAGGTCGCCA GTGGTCTCGA CTTCCTGTTC
GGGATCGACC CGGGCATCCT GACCCAGGTC ATCGTCATCG GCTGCATCAC CTCCATCGCG
ATCGTGTCGG TGGTGCGCGG TCTGGATGGC GGCGTGAAGG TGTTGTCCAA CATCAACATG
GTCATGGCCG GCATCTTCCT GCTGTTCATC TTCATCGTCG GGCCGACGCT GCTGATCGCC
AACGGATTCT GGGAGAACAC GGTCGACTAT GTCCGCGATT TCCTGCCACT GGCCAACTGG
ATCGGGCGTG AAGACACCGA ATGGTTCCAT GGCTGGACGG TGTTCTACTG GGCCTGGTGG
GTCTCCTGGT CGCCCTTTGT CGGCATGTTC ATCGCACGGG TGTCCAAGGG GCGGACTGTC
CGCGAATTCC TGGTCGCCGT GATCTTCGTG CCGATGCTGA TCACGATTGT CTGGTTCTCG
ACTTTCGGCG AGACCGCGAT CTTCCAGTAC GAAAACGGTA TCGGCGAGCT GGCTGATGGA
GTCGGCGAGG TGTCCCTTGT GTTGTTCCAG ATGTTGGACC ACCTGCCGTT TGCCGCCATC
ACGTCCTTTA TCGCCATAAT CCTGGTCTTT GTGTTCTTCG TGACCTCGTC CGATTCCGGC
TCACTGGTGA TCGACTCGAT CACCGCTGGT GGCAAGCTGC ACGCTCCGGT GCCGCAACGC
ATTTTCTGGG CCTCGATCGA GGGGCTGGTC GCGGCGGTGC TGCTCTATGG CGGCGGTGCC
CAGGCCCTGC AGGGTTTGCA GGCCGGCGCG ATCACGGCCG GTCTGCCCTT CATGGTCGTG
CTTCTGGTGT GCTGTTACAG CCTCTGGAAG GGGTTGTGGT CGGATTTGCG GGCCCAAAGG
GCATTGGACG CGGCACAGTC CAAGCCGGCC GAGGCGGAAG GCTAG
 
Protein sequence
MTRRLYKTDH EIGQDNISVL GLDVHNPVFF ISAVIMIGFV TAAVLMPEAV SAALFAARDW 
VLATFDWFFV LGVNLVFLFC LVVMVSPLGK LRIGGSAAKP DFSTRSWLAM LFSAGIGIGL
MFWGAAEPLA YHTEWFGTPL GVEPGTDASA RLALSATMFH WGLNAWSIYA VLGLALAYFT
FSKGLPLTVR SAFYPLLGER IWGWPGHLID LLAVVATLFG LATSLGLGAQ QVASGLDFLF
GIDPGILTQV IVIGCITSIA IVSVVRGLDG GVKVLSNINM VMAGIFLLFI FIVGPTLLIA
NGFWENTVDY VRDFLPLANW IGREDTEWFH GWTVFYWAWW VSWSPFVGMF IARVSKGRTV
REFLVAVIFV PMLITIVWFS TFGETAIFQY ENGIGELADG VGEVSLVLFQ MLDHLPFAAI
TSFIAIILVF VFFVTSSDSG SLVIDSITAG GKLHAPVPQR IFWASIEGLV AAVLLYGGGA
QALQGLQAGA ITAGLPFMVV LLVCCYSLWK GLWSDLRAQR ALDAAQSKPA EAEG