| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_2457 |
|---|
| Symbol | |
|---|
| ID | 4286642 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | - |
|---|
| Start bp | 2673141 |
|---|
| End bp | 2673707 |
|---|
| Gene Length | 567 bp |
|---|
| Protein Length | 188 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 638141961 |
|---|
| Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
|---|
| Protein accession | YP_757687 |
|---|
| Protein GI | 114571007 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
|---|
| TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 55 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACTTC AGCGCCTCGA TATTCCGGAC GTCATTGTCG TCACGCCCCG TCGCTTTGAA
GATGATCGGG GTTATTTTTC CGAGACCTAT AATGAAACGG TTTTCGCCGA GGCAGGGATT
GGCGCCCGTT TTGTCCAGGA CAATCATTCC TGCTCACTCC AGGCCGGTAC GGTTCGAGGA
CTGCACTACC AGTCGCTGCC GCATGCACAA GGCAAGCTGG TTCGTGTGAC AAGCGGAGCG
ATTATCGATG TTGTTGTCGA TGTGCGCCGC GGAAGCCCCC ATTTCGGGCA GCACGTGAAA
GCGGAAATAT CGGCCGAGAA GGGCAGCCAG ATCTGGGTGC CGGCCGGGTT CCTACACGGT
TTCATAACCT TGCAGCCCAA CACCCATGTC ACTTACAAGG TCACTGACTT TTACGATGCC
GGCTGCGACG GCTCGGTCTT GTGGTCGGAT CCGGCACTGG GTATTGATTG GGGAATTGGC
CAGTCGGACG CGATTTTGTC AGATAAAGAT GCCGAGGCCC AGTCTTGGCA GGAATTCAGT
TCGCCATTTT TATACCCGCC TGCTTGA
|
|---|
| Protein sequence | MELQRLDIPD VIVVTPRRFE DDRGYFSETY NETVFAEAGI GARFVQDNHS CSLQAGTVRG
LHYQSLPHAQ GKLVRVTSGA IIDVVVDVRR GSPHFGQHVK AEISAEKGSQ IWVPAGFLHG
FITLQPNTHV TYKVTDFYDA GCDGSVLWSD PALGIDWGIG QSDAILSDKD AEAQSWQEFS
SPFLYPPA
|
|---|
| |