| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_2268 |
|---|
| Symbol | |
|---|
| ID | 4286734 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | + |
|---|
| Start bp | 2470630 |
|---|
| End bp | 2473497 |
|---|
| Gene Length | 2868 bp |
|---|
| Protein Length | 955 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 638141770 |
|---|
| Product | protein translocase subunit secA |
|---|
| Protein accession | YP_757498 |
|---|
| Protein GI | 114570818 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
|---|
| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCTCCA TTGCCCGCAA GATCTTCGGA ACCGAGAACG ACCGCAAAAT CCGCCGCCTG
CGGCCGATGG TCGAGAAAAT CAACGCGCTC GAGCCCGACT TCGAGGCCTT GTCCGACGAT
GCGCTGAAGG CCAAGACGGT GGAGTTCCGC GAACGCCTGG ACAAGGGCGA GAAACTGGAC
GCGCTGATGC CGGAGGCCTT CGCCGCTGTC CGCGAAGCCG CCAAGCGGGC CCTGGGCCTG
CGCCCCTATG ACGTCCAGCT GATGGGCGGC ATGGTGCTGC ACGAAGGCTC GATCGCCGAG
ATGAAGACCG GTGAGGGCAA GACGCTGGTC GCCACCCTGC CCTGCTATCT CAACGCCCTG
CCGGCCAAGG GCGTGCACGT CGTCACCGTC AATGACTATC TCGCCACTCG CGACAGCGAA
TGGATGGGCC GTGTGTTCGC ACAACTCGGC CTGACCACCG GCGTGGTCGC CCACGGCATG
ACCGATCCGG AACGCCGCGC GGCCTATGCC TGCGACATCA CCTACGCGAC CAATAACGAA
CTCGGCTTCG ATTATCTGCG CGATAACATG AAGTACTCGA CCGAGGAGAT GGTGCAACGC
GGGCACGGCT TTGCCATCGT CGACGAGGTC GACTCGATCC TGATCGATGA AGCGCGCACC
CCGCTGATCA TCTCCGGCCG GACCGAGGAT CGCACCGAAT TCTACAAGAC GATCAACGAG
CTGATCCCGC TTCTCGGCGA GGATTGCTAC GAGATCGACG AGAAAGCCCG CTCCATCCTC
CTGACCGAGG AGGGCAATGA AGAGATCGAA CGCCTGCTGA ATGAGCGAGA GCTGCTCGCG
GAGGGCGATC TCTATGATGT CGAGAACATC CAGGCCGTTC ACCACGTCAA CCAGGCCCTC
AAGGCGCACA AGATCTTCGT GCGCGACAAG GATTACATCA TCAAGGACAA TGCCGTTGTC
CTGATTGACG AGTTCACTGG CCGGATGATG CCGGGCCGTC GCCTGTCCGA TGGCCTGCAC
CAGGCGATCG AGGCCAAGGA AGGCACCGAC ATCCAGCCGG AAAACCAGAC GCTGGCATCG
GTCACCTTCC AGAATTATTT CCGCCTCTAT GACAAGCTGG CCGGCATGAC CGGTACGGCT
TTGACCGAGG CCGACGAATT CTTCGACATC TACAAGTTGG CGGTGATGGA AATCCCGACC
AACAAGCCGA TCGCCCGGAT CGACGAGGAA GACGAAGTCT ACCGCACGCT GGAAGAAAAA
TACGCCGCCA TTATCGACGA GATTGTTGAC TGCCAGCAGC GCGGTCAGCC GGTATTGGTC
GGTACGGCCT CGATCGAGAA GTCGGAAATC ATCGACCGGT TGATGAGCGA CAAGGCCCTG
TTCAAGAAGA TGCTGGGCCA TCTCTATCCA AAAGACGAAG CCGCCAAGGC CGAGTTCGAG
AAATCGGCCC GCCCGGTCGA GCGGACCCTG CCGGAAATGC TCAAGCTGAT CCCGATCGAG
CACCAGGTGC TCAATGCGCG CTATCACGAG CAGGAAGCCT TCATCGTCGC CGAGGCCGGC
GTGCCGGGCG CGGTGACGAT CGCCACCAAT ATGGCCGGCC GCGGTACCGA CATCCAGCTC
GGCGGCAATG CCGACATGCG CCTCGACGCC TGGAAAGCTG AACAGGAAGC CGCCGGCAAG
ACCCCAACCC AGACCGAGAT CGACCGCCAG GCCGACGCCA TCAAGTCCGA AATCGCCGAG
AAGAAACGCC ATGCGCTCGA CGCTGGCGGC CTCTACGTGC TCGCCACCGA GCGCCATGAA
AGCCGCCGCA TCGACAACCA GCTGCGCGGC CGGACCGGTC GTCAGGGTGA TCCGGGCCGC
TCGAAATTCT TCATTTCGGT GCAGGACGAC CTGCTGCGGA TCTTCGCGCC GGAACGCCTC
GACACCATCA TGCGCACGCT GGGCATGAAG GAAGGCGAAG CGATTCAGCA CCCGTGGATG
TCCAAGGCAC TGGAGACCTC GCAGCGCAAG GTCGAGCAGC GCAATTTCGA CATCCGCAAG
AACGTCCTCA AATACGATGA CGTGATGAAT GACCAGCGCA AGGCGGTGTT CGAACAGCGC
ATCGACTTCA TGGTCTCCGA TGACGTCGCC GACGTCATCA AGGACATGCG CCAGTCGACC
GCGGAAGATC TGGTCAGTGC CCATATCCCG CCGAAAGCCT ATGCCGACCA GTGGGACATC
AGCGGCCTCA AGGAAGCCTT GCAGGAAACC TTCGGTCTCA ACCTGCCGGT CGAGGCCTGG
GCCGACGAGG AAGGCATTGC CGACGAGGAA ATCCTCGAAC GCGTGTCGGA AGCCGCCGAC
AAGGCCTATG CCGAAAAGGC TGCCAATGCC GGTCCCGAGC TGATGCGCCG GATCGAGAAA
TCGATCCTGT TGCAGGCCAT CGACATCAAT TGGCGCGAGC ACCTGCAAAA CCTCGATGCC
ATGCGCTCGA TGATCGGCCT GCGCTCCTAC GCCCAGCGCA ACCCGCTGAA CGAATTCAAG
ACCGAAGCCT TCAACCTGTT CGAGCGCATG ATGGACAATC TGCGTGGCGA AGTGACCAAG
CAGTTGATGC TGATCCGCTT CGAGCGCGCA CCGGCGCCGC CCAAGGAGCC GGAAGGCCTG
ACCGCAACCC ATATCGATCC GCGCACCGGC CGCAATGAGA TGGCCGATCC GGGCGATGGC
CCGGTCGCAC CGCGAGTCGC TCCGACCCAG CGCCGCGTTT CGACACCGGC CCATCCGAAC
AAGCCGGAAA CCTGGGGCCG CGTCGCTCGC AACGCCCCCT GCCCGTGCGG TTCCGGCAAG
AAATACAAGC AGTGTCACGG CGCCATCGAC GGCGCTCCGA CGGCCTGA
|
|---|
| Protein sequence | MLSIARKIFG TENDRKIRRL RPMVEKINAL EPDFEALSDD ALKAKTVEFR ERLDKGEKLD
ALMPEAFAAV REAAKRALGL RPYDVQLMGG MVLHEGSIAE MKTGEGKTLV ATLPCYLNAL
PAKGVHVVTV NDYLATRDSE WMGRVFAQLG LTTGVVAHGM TDPERRAAYA CDITYATNNE
LGFDYLRDNM KYSTEEMVQR GHGFAIVDEV DSILIDEART PLIISGRTED RTEFYKTINE
LIPLLGEDCY EIDEKARSIL LTEEGNEEIE RLLNERELLA EGDLYDVENI QAVHHVNQAL
KAHKIFVRDK DYIIKDNAVV LIDEFTGRMM PGRRLSDGLH QAIEAKEGTD IQPENQTLAS
VTFQNYFRLY DKLAGMTGTA LTEADEFFDI YKLAVMEIPT NKPIARIDEE DEVYRTLEEK
YAAIIDEIVD CQQRGQPVLV GTASIEKSEI IDRLMSDKAL FKKMLGHLYP KDEAAKAEFE
KSARPVERTL PEMLKLIPIE HQVLNARYHE QEAFIVAEAG VPGAVTIATN MAGRGTDIQL
GGNADMRLDA WKAEQEAAGK TPTQTEIDRQ ADAIKSEIAE KKRHALDAGG LYVLATERHE
SRRIDNQLRG RTGRQGDPGR SKFFISVQDD LLRIFAPERL DTIMRTLGMK EGEAIQHPWM
SKALETSQRK VEQRNFDIRK NVLKYDDVMN DQRKAVFEQR IDFMVSDDVA DVIKDMRQST
AEDLVSAHIP PKAYADQWDI SGLKEALQET FGLNLPVEAW ADEEGIADEE ILERVSEAAD
KAYAEKAANA GPELMRRIEK SILLQAIDIN WREHLQNLDA MRSMIGLRSY AQRNPLNEFK
TEAFNLFERM MDNLRGEVTK QLMLIRFERA PAPPKEPEGL TATHIDPRTG RNEMADPGDG
PVAPRVAPTQ RRVSTPAHPN KPETWGRVAR NAPCPCGSGK KYKQCHGAID GAPTA
|
|---|
| |