Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmar10_2176 |
Symbol | |
ID | 4284412 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Maricaulis maris MCS10 |
Kingdom | Bacteria |
Replicon accession | NC_008347 |
Strand | - |
Start bp | 2372965 |
End bp | 2373732 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638141678 |
Product | cell wall hydrolase, SleB |
Protein accession | YP_757406 |
Protein GI | 114570726 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3773] Cell wall hydrolyses involved in spore germination |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.319369 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACCTCG ACGCGGCACG CAGCCAGCAA AAGCAGGTAG CGACAGCATT GCATATGCTG GCGACCCTGG TGCTGTGCGC GCTTACCGTC CTGCTCCTGA ACTCCGCTTC CGACCGGGCC CGGCAACAGG ACGAGACACT TGTCTGGCAG GCCATGGCCA CGCGCTATCT GCACGCCGGC GATGTCGATG CGGCCTGGCA GGCGCCGGAA CAGCTGCGAA TTGCCTCCCT CATGCTGGAG GCCGACAGCG AGGTCGGCGC CGTGCTGACG GCCCGTCCGC TGGATGATCT GCGCACCTTC GACAGCTCGC ACTTTGAAAA CGCGGCTGGC ATCAGCGCTC AGGTCGATTG CCTGGCCCAG GCGATCTATT ATGAAGCCCG CAGTGAGGGT TTCGTCGGTC AGCTGGCCGT TGCCCAGGTG ATCATGAACC GGGTTGATAG CCGCCACTAT CCCAACACGA TCTGCGGTGT CGTGTTCGAG GGGTCTGAGC GCACGACCGG TTGCCAGTTC ACCTTCACCT GTGACGGCTC GATGGTGCGC GAAGCGCGGG GCCGGTCCTG GCGTCGCTCG CAGCTGGTTG CCCAGCATGC CTATATGGGT TTTGGCCGCG ACGTCACCCG CCGCGCCACG CACTACCACA CCGTTGCGGT GGATCCGTAC TGGAACTCCA ATCTGGTGCG CACGCGTCGT ATCGGTACGC ACATCTTCTA CCGTTTCGCC ACGCGCCGCG AACGCGCTGC AGGCATTGTG CGCGAGCGCG ACGCGTAG
|
Protein sequence | MDLDAARSQQ KQVATALHML ATLVLCALTV LLLNSASDRA RQQDETLVWQ AMATRYLHAG DVDAAWQAPE QLRIASLMLE ADSEVGAVLT ARPLDDLRTF DSSHFENAAG ISAQVDCLAQ AIYYEARSEG FVGQLAVAQV IMNRVDSRHY PNTICGVVFE GSERTTGCQF TFTCDGSMVR EARGRSWRRS QLVAQHAYMG FGRDVTRRAT HYHTVAVDPY WNSNLVRTRR IGTHIFYRFA TRRERAAGIV RERDA
|
| |