| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_2115 |
|---|
| Symbol | |
|---|
| ID | 4285750 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | + |
|---|
| Start bp | 2301632 |
|---|
| End bp | 2302708 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638141616 |
|---|
| Product | RND family efflux transporter MFP subunit |
|---|
| Protein accession | YP_757345 |
|---|
| Protein GI | 114570665 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0845] Membrane-fusion protein |
|---|
| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.243289 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGCA TCCCGCTCCT CGCCGCCCTC GGCACCAGCC TCCTCCTCGC GGCCTGCGCC
GAGGAAATTG TCGCGCCGCC ATCGCCGCCG CGCCTGGTCC AGCTTGCCGA AGTGGTCGCA
GACAGCGGCG AGACGCGGCA CGAATTTGTT GGCCGGGTCG AGGCCCGTCT GAGCGTCGAC
ATGGCGTTCC AGGTCGGCGG GCAATTGGCC GACCTGCCGC TCAATGAGGG CATACTGATC
GAACAGGGCA CGCTGGTCGC TGCCCTCGAC CGTGAAGATT TCCAGCGCGC CGAACGCGAA
GCCCGGGTTC AGTTGCAGCA GGCCAATACC GAGCTGGAAC GCCAGCGCAC CCTGCACGAG
CGCGGCATCG CCTCGCAGGC CGCCCTCGAC AGCGCCCAGA CCAATTACGA CCTGCGTGAA
GTGGCGCTGC AGACGGCTCG CCGCAATCTG GGCTATGCGA CCCTGACCGC GCCCTTCGAC
GCGCTGGTCA GCCGCCGTCT CGTCGACAAT TACACCATCG TCTCGCCCGG CCAGCCGGTG
GTGCGCCTGA TGGATGTGTC GGAATTGCGC GTCTCCATCC CGATTTCCGA GAGCATGGTC
GCCACCTTCG ACCGCGAGGA CCTGGTATCG CTGGAAGCGG CATTTGCCTT CCTGCCTGGC
CAGACCTTTC CGCTGGAGCC ACGCGAACTG GTGTCCGAAC CGGACTCGGC CTCGCGCACC
TATCGCGCCA TCGCGGCCCT GCCCGGTGAC ATGCCGGCCA ATCTCCTGCC CGGCATGACG
GCGACGGTGT TTTCCGAATT CGCCAACAAT GGCAATTCCG GCACGGGACT GCGTGTCCCC
CTCAATGCGG TCGCGGCGGC ACCGGACGGT TCGCAGCGTG TCTGGGTGTT TGATCCGGAC
ACCAGCACGG TCAGTTCCCG CCCTGTCACC AGCGACGGCT TCGAGGGCGA CATGATCATC
ATCGAAACCG GCCTTGCTGC CGGTGACCAG GTTGTCACTG CCGGGGTCTC AGCCCTGCAC
GAAGGCATGA CCGTCCGCCC ACTCGCCGAC AATACCCGCT TCGGACAACC GCAATGA
|
|---|
| Protein sequence | MTRIPLLAAL GTSLLLAACA EEIVAPPSPP RLVQLAEVVA DSGETRHEFV GRVEARLSVD
MAFQVGGQLA DLPLNEGILI EQGTLVAALD REDFQRAERE ARVQLQQANT ELERQRTLHE
RGIASQAALD SAQTNYDLRE VALQTARRNL GYATLTAPFD ALVSRRLVDN YTIVSPGQPV
VRLMDVSELR VSIPISESMV ATFDREDLVS LEAAFAFLPG QTFPLEPREL VSEPDSASRT
YRAIAALPGD MPANLLPGMT ATVFSEFANN GNSGTGLRVP LNAVAAAPDG SQRVWVFDPD
TSTVSSRPVT SDGFEGDMII IETGLAAGDQ VVTAGVSALH EGMTVRPLAD NTRFGQPQ
|
|---|
| |