Gene Mmar10_1907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmar10_1907 
Symbol 
ID4286425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMaricaulis maris MCS10 
KingdomBacteria 
Replicon accessionNC_008347 
Strand
Start bp2089120 
End bp2089935 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content61% 
IMG OID638141407 
ProductSec-independent protein translocase TatC 
Protein accessionYP_757137 
Protein GI114570457 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0805] Sec-independent protein secretion pathway component TatC 
TIGRFAM ID[TIGR00945] Twin arginine targeting (Tat) protein translocase TatC 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0775947 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.712329 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAA TCGAGCATGA TGAAGTCGAG GCGAGCCGGG CGCCGCTGAT CGAGCACCTG 
ATCGAGCTGC GCTCGCGCCT GGTTGTGATC ATGGGATTTT TGCTGGTCGG CTTCATCGGC
TGCTTCATCT TTTCCGAGAC GCTCTACCAG TGGCTGCTGC TGCCTTACCG GGATGCGGCC
TCCATCGTGC GCGGTGTCCC GGTCGAGGAA TTGGACCTGA CGGCCAATTT CTTCGCCCCG
CTGGAATTCT TCTTTGTCCG GCTGAAACTC TCCCTGGTCG GCTCGGTGAT CATCATCTTC
CCGGTCATCG CCTGGCAGAT TTACGGCTTC GTCGCACCGG GCCTGTACAA GAATGAGCGC
GGCGCCTTTG CCCCCTTCCT GGCCATGTCG CCAGTTCTCT TCGGGGTGGG GGTCAGCTTT
GTCTACTTCC TGGTCCTGCC CATGGTGATG CGTTTCTCGC TGGGGCAGGA GCAATCCGCC
GAGCTGGTCG GCACGCGCAT CGAGCTTCTG CTCAATGTCT CCGACTATAT GAACCTCATC
ACCACGCTGA TGCTGGTCTT CGGAATCTCC TTCCAGATGC CGGTTTTCCT GATGCTGCTG
GCCAAGGCCG GCATCCTCAA GGCGAAGACC CTGCTGAAGG GCTGGCGTTT TGCGGTGGTC
GGGATTGCCC TGTTTGCGGC CTTTGCCACG CCGCCGGATC CGATTTCCCA GATCATGCTC
GGCGGCGCGC TGCTGCTGCT CTACTTCATC TCGATCGGCG GCATGCATCT CATGCAGTCC
TCCGACGACC GGGCGGACGA CACGCAAGAG GACTGA
 
Protein sequence
MAEIEHDEVE ASRAPLIEHL IELRSRLVVI MGFLLVGFIG CFIFSETLYQ WLLLPYRDAA 
SIVRGVPVEE LDLTANFFAP LEFFFVRLKL SLVGSVIIIF PVIAWQIYGF VAPGLYKNER
GAFAPFLAMS PVLFGVGVSF VYFLVLPMVM RFSLGQEQSA ELVGTRIELL LNVSDYMNLI
TTLMLVFGIS FQMPVFLMLL AKAGILKAKT LLKGWRFAVV GIALFAAFAT PPDPISQIML
GGALLLLYFI SIGGMHLMQS SDDRADDTQE D