Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmar10_1905 |
Symbol | |
ID | 4286423 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Maricaulis maris MCS10 |
Kingdom | Bacteria |
Replicon accession | NC_008347 |
Strand | - |
Start bp | 2081574 |
End bp | 2087465 |
Gene Length | 5892 bp |
Protein Length | 1963 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638141405 |
Product | putative outer membrane adhesin like proteiin |
Protein accession | YP_757135 |
Protein GI | 114570455 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2931] RTX toxins and related Ca2+-binding proteins |
TIGRFAM ID | [TIGR01965] VCBS repeat |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.849124 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCATGG CGACGAAAAA ATCAAACAAC CAGGCACGAC AGTCGGCAGC CAACGCCGCG GCGCCGGCCA ATCCGGGCAT CGACATTGAT GGCTCCGGGC GCGGTGACCT CCTGTTCGGT ACCGGTCGCG ACGACATCAT TGACGGGCGC GGCGGCAATG ATCTGATCCT CGGACTGGGC GGCGATGATG TCATCTCGGG CGGTGGCGGC CATGATTTCG TCCTTGGCGG GGCCGGCGAT GACGATATCA GCGGCGATGC GGGCAATGAC TTCCTGTCCG GCGGCAGCGG AAATGATGTG ATTTCCGGCG GGCGCGGCAG AGATTTTGTC CTCGGTGGCA GCGGTGACGA CCAGATCAGC GGTGGCCGCG GCGGGGACAC CTTGAACGGC GGCGACGGCA ATGATGTCAT TGATGGTGGT GCCGGCAATG ACCGCGTCTC CGGTGATGCG GGTGACGACT TCCTGTCCGG CGGTGCCGGC AGAGACACAC TGCTCGGCGG CGATGGTGAC GACATCCTGT CCGGCGGTGC GGGTCGGGAC ACCATTATTG GTGGTCAGGG GCATGACACG CTCGTCTATG GTGGCAGCGT TCGCGATGCA CAGGTCACGG GTGACAGCAA TCAGGCGGAA GTCCGGGGCG CGGACGGCCG CGACACGCTG GAGGGTGTCG AGGCCATCCA GTTCGACGAT GGGACGGTCT ATCTGGACGG GCGCAATAAC GGCCCGATGG TCGAAGACCA GGCGGCCACG ATCAGCGAGA ACGACATTGC GGTCATCGTC AATGTTCTCG ACGGCGCGTT TGACTTTGAT GGCGACGCGA TTTCGCTCCT GTCGGTCGAT GCCGGGGATT TCGCCGGGAC GGTCAGCTTT GATGCCGCCA GCGGCGAGGT TTCGCTCATG CCGGGCGCTA CCTATGACCA TCTGACCGAA GGCGAGAGCG TCGAGGTCAC GCTGACCTAC ACCGCCACGG ACGGCACGGA CACGACGACC GGAATAATAG CGGTCACGAT CACCGGTATC GATGACGAGC CCCTGATCAC GGCGATCGAT CTGGGCGCGC AGAATGAGGA TGACGGCTTC ATCTCCGTCG ATCTGTTGGC CACAGCCAAT GGCGACGTGA TCGGCATCGA GGAGATCCAG TCGGTCGCCT CGTCCAATCC GGACCGGACG ATCAGCTGGG GCCTCGACCC GAACAATTAC GACGCGGTGC GGCTCGACCT TAACCAGTTC ACCGATCTTC AGGCCGGTGA GACCGAGACG GTGACCATCA CCTATGTGGT CGGCGACAAT AATGGTGGCC TGACCACCAA TACCGCGACC TTCGTGGTTG AAGGCACGAA CGACCTGCCG ACCTTCGTCG ACTTCACCCT GTCACTGGGC GAGAGCGAGC CGCTGTGGGT CAATCTTCTG TCCGGCGTCC AGGACGTCGA CAGTGACACG GTGATCGTCA CCGATGTGGT CGCCTCGACC AACAATCCGG ACCGAGTGGT CACAGCCAAC GTCAACTATG TCGACGGTAC GGTGACCTTC CCCTATGGCC AGTACGAAGA TCTGGCCGAA GGCGAAACCG AAATCCTGAC CATCAGCTTC AACCTGGATG ACGGCGATGG CGGCGTGGTG GCTCGCGAGC TGAGCTTTAC CATCGTTGGC GAGAATGACG CCCCGAACGT GGTGCCGATC GACATGGGCA CCCAGAGTGA AGATGGCGGC TTTATCTCGG TCGATCTGAT GTCGACGGCG AGCGATATCG ATACCAATGA CGTGATCGGC ATCGAGGAGA TCCAATCAGT CGCCTCGTCC AATCCGGACC GGACGATCAG CTGGGGCCTC GACCCGAACA ATTACGACGC GGTGCGGCTC GACCTTAACC AGTTCACCGA TCTTCAGGCC GGTGAGACCG AGACGGTGAC CATCACCTAT GTGGTCGGCG ACAATAATGG TGGCCTGACC ACCAATACCG CGACCTTCGT GGTTGAAGGC ACGAACGACC TGCCGACCTT CGTCGACTTC ACCCTGTCAC TGGGCGAGAG CGAGCCGCTG TGGGTCAATC TTCTGTCCGG CGTCCAGGAC GTCGACAGTG ACACGGTGAT CGTCACCGAT GTGGTCGCCT CGACCAACAA TCCGGACCGA GTGGTCACAG CCAACGTCAA CTATGTCGAC GGTACGGTGA CCTTCCCCTA TGGCCAGTAT GAAGATCTGG CCGAAGGCGA AACCGAAATC CTGACCATCA GCTTCAACCT GGATGACGGC GATGGCGGTG TGGTGGCTCG CGAGCTGAGC TTTACGGTGA TCGGGCAGAA TGATGCGCCT TACATCGAAC CATGGAACTC CTCGCTTGAG GGAACGGTCG ATGAGAATGA TGCAGTAAGC CTGTTCTCGG CCGGTTCGAT CGTGTACGAC GATGTTGACG CCAGTGACCA GCACTATGGC TATATCAACA ATGTGTCTCT GTCGGGTGAG GCAGGAAATC TCAATCCGGG TAGTCTGTAC GGCCTCCTGC GTCTGGACGA CTATGCCTCT GGCGGCGCGC TGGGCTGGAC CTTCAACGCC GACAGCGGAT TGTTCGATTA TCTGCAAGAG GGTGAGAGCG TCACCCTGAC CTATGATGTC GAGGTCAGCG ACGGCCGCGA GGGTGGCCAG ACAACCGTGT CGATCACCAT CGAAGGTACG AATGATCTTC CGGTCTTCAA CGGCTACTCA TTCTCCCTGG GCGAGAGCGA GCCGCTGTGG GTCAATCTTC TGGCCAGTGT CCAGGATGTC GACAGTGACA CGCTGACAGT CACTGATGTT GTCGCCATGA CGAATAATCC CGACCGGGTG GTCGTGGCGA ACGTCAATTA TGCCGATGGC ACGGTGACCT TCCCCTATGG CCAGTATGAA GACCTGGCCG CGGGCGAGAC AGAGACCCTG ACCATCCGCT TTAACGTTGA TGATGGTGAT GGCGGCGTCG TCCCGTGTGA GCTTAACTTC ACCGTGATCG GGCAGAATGA TGCGCCCTAT ATCGAGCCGT GGAACTCCAC ACTCGAAGGC ACGGTCGACG AGAATGACGC GCCGGTCCTG ACGACCGGAG GCACTATTGT GTTCGATGAT GTTGATGCCA GCGATCAGCA CTACGGCTAC ATCAACAATG TCACCCAGAC GGGCACGGTC GGTGACTTCA ACATATACGA CCTTTTTGGC CTGCTGCGCC TGGACGACTA TGCCTCGGGC GGCGCGCTGG GCTGGACCTT CAATGCCGAT AGCGGCCTGT TCGACTATCT GCAGGAGGGT GAGAGCATCA CCCTGACCTA TGACGTCGCA GTCAGCGATG GCCGCGAAGA TGGCCAGACA ACCGTGTCGA TCACCATCGA AGGTACGAAT GATCTGCCGA CCTTCATCGA CTTCGGCCAT CAGATCGATG AAAGCACGTC GCTGTGGGTC AACCTTCTGT CTGGCGTCCA GGACGTCGAC AGCGATGCGG TGACAATTTC GGATGTGGTT GCCTATACCG ACAATCCGGA CCGGGTCGTC GCACTTGATG TCAATCTGGC AGAAGGGACG GTGCGTTTCC CTTATGGCCA GTATGAGGAC CTCGCCGAGG GCGAGAGCGA GATCCTGACC ATCAGCTACA CGATTGATGA CGGCGATGGC GGAGTCGTGC CGGCTGAAAT GCACTTCACG GTGATCGGGT CGAACGACGC TCCTTATATC GAGCCGTGGA ACTCCACACT CGAAGGCACG GTCGACGAGA ATGACGCGCC GGTCCTGACG ACCGGTGGCT CGATCGTATT CGACGATGTT GATGCCAGCG ATCAGCACTA CGGCTCTATC AACAATGTCA CCCAGACGGG CACGGTCGGC GACTTCAACA TCTATGACCT TTATGGCCTG CTGCGCCTGG ACGACTATGC CTCTGGCGGC GCGCTGGGCT GGACCTTCAA TGCCGACAGC AGCCTGTTCG ACTACCTGCA GGAAGGCGAG AGCGTCACCC TGACCTATGA TGTCGAGGTG ACCGATGGCC GTGAGGGTGG CCAGACGACG GTCTCGATCA CGATTGAAGG GTCGAATGAC CTGCCCAGCT TTGTCGACTT CACGATCTCG TTCGGTGAAA GCGAACCGCT GTGGGTCAAT CTTCTCGCCA GCGTCCAGGA CGTCGACAGC GACACGGTGG TCGTCACCGA TGTCACGGCC CATACCGACA ATCCCGACCG CGTTGTCGTG GCCAATGTGG ACTATGAGGC CGGTACGGTC TCCTTCCCCT ATGGCCAGTA TGAAGACCTG GCCGAGGGCG AAACCGAAAC GCTGACCATC AGCTTCAACC TCGAAGACAG TGATGGCGGG GTGCTGCCGC GCGAATTCAA TTTCACGATC ATCGGGCAGA ATGATGCGCC CTATTTCGAG CCGTGGAACT CCTCGCTGGA CGCGACTGCC GACACTGGCA ACGCTGGGCA GCTTGAAGCG AGTGGCGTGA TCGGGATCTG GGATCCGGAT GCCAGCGACG AGCACACGGG GGCCACGCTC AGCGTCAGCC TTGCCGGCGA TGTCGGTGGG CTGACTGAAG CCGATGTCCT GGGCCTGCTG AGTTTTGACG GCTCCCGCCC GGACGCGTCG GTCGACTGGT CTTTCGCGTC GGACTCCACA CTCTTCGCCT ACCTGTCGAC GGGTGAGAAC GTCACGCTGA CCTATGAGGT CGAAATCTCC GACGGGCATG ACAGCGTGAC TGCCCCGGTC ACCATCACCA TCACGGGGCA GAATGATCTG CCGATGGTGA GCGCGGACAT TGCTGTGGCG ACGCACGAAG ACGCAGCGCC ATTGCTGGTC GATCTGTTCG CCAATGCCAG CGATCCGGAA GGTGATGACA TGGCGGTTAC CGGTGTCGTC GTCACGACGG CGTCCGGTCG CACGGTCGAT TTTTCCGTTG ATGCGCTGAC CGGTGAGATG GTTATCGATC CCGCCCAGTT CGGTGATCTT GATGCCGGTG AGTTGGAAAC ACTGACGGTG AGTTATGGTA TTGGCCATGC CGACACGGTC ATCACGGGCG GGGCGGACAG TATTCCGACG ATCGGCAATG CCGGGCGTTG GTTCGTGGTT GATCTGGACA GTGGCCAGAC CGTCCAGGAG GCTCGCGGCA GCGGCAATTC GGCCGAGCCC TTCGCCGTTC CGGCCAATGG CGTCGTTTTC CATTTCAATG GCAACAATGC CGATTATGTC ATTGCTGCCA CCGCTTATGT CGATGGCGTG GCCAGCGTGA TTGATCCGGC CGGATTCGAG ATTTCCGGCT ATTCGGGCAC ATTGTATGAA GACGGGGTGT GGCTGAACTT TGCCGACACA ATCAGCGACG CCATGATCAG CTGGACAGGC ACGATCGAAA CCGTCGACGG TCCGCGCCAG GTCAGCTTCA CCTTTGACGG CCTCAATTTC ACCGACAACC AGACCGGCAC GTCGACGCTC GATAGCTTCT CTGTCGAGGT CAGCGGCCCG CGTACGGCGG CAATTGCCGT AATTGAGGTC GAAGGCCGCG ACGAGGGCGC GGCCATGGAG GCTCGGGTCT TCTCGAAGGG CGAGGTGATC GATGTCGCCA AGGTCCCGGT CGCCGACACG CTGACGGATG GGGACGCCGG GTCGACCGAC GGACTGGTCA CCCTGTCACA CGAAGACGCG CTGACCGTCA TCACAGCGGC AGATGTGGCG GATTTCGCCT TTGAACGGGT GTTCGACGTC ACCAATTTCC GGGGGGCGGT GCAGTTCGCC AGCCTCACGG AAGCCGATGA CACTGCAATG GAAGTCGACA GCGTGCAGCC CGCGCTTGGT CAGGCAGATG CATTCGACTT GCCCGGTCTG GATGCGTTCG GCCTGCCTCA AGATGATGCG GCTTTGACCA TGCCCCTGCC AGAAGTGCCC GAAGGCTGGT AG
|
Protein sequence | MIMATKKSNN QARQSAANAA APANPGIDID GSGRGDLLFG TGRDDIIDGR GGNDLILGLG GDDVISGGGG HDFVLGGAGD DDISGDAGND FLSGGSGNDV ISGGRGRDFV LGGSGDDQIS GGRGGDTLNG GDGNDVIDGG AGNDRVSGDA GDDFLSGGAG RDTLLGGDGD DILSGGAGRD TIIGGQGHDT LVYGGSVRDA QVTGDSNQAE VRGADGRDTL EGVEAIQFDD GTVYLDGRNN GPMVEDQAAT ISENDIAVIV NVLDGAFDFD GDAISLLSVD AGDFAGTVSF DAASGEVSLM PGATYDHLTE GESVEVTLTY TATDGTDTTT GIIAVTITGI DDEPLITAID LGAQNEDDGF ISVDLLATAN GDVIGIEEIQ SVASSNPDRT ISWGLDPNNY DAVRLDLNQF TDLQAGETET VTITYVVGDN NGGLTTNTAT FVVEGTNDLP TFVDFTLSLG ESEPLWVNLL SGVQDVDSDT VIVTDVVAST NNPDRVVTAN VNYVDGTVTF PYGQYEDLAE GETEILTISF NLDDGDGGVV ARELSFTIVG ENDAPNVVPI DMGTQSEDGG FISVDLMSTA SDIDTNDVIG IEEIQSVASS NPDRTISWGL DPNNYDAVRL DLNQFTDLQA GETETVTITY VVGDNNGGLT TNTATFVVEG TNDLPTFVDF TLSLGESEPL WVNLLSGVQD VDSDTVIVTD VVASTNNPDR VVTANVNYVD GTVTFPYGQY EDLAEGETEI LTISFNLDDG DGGVVARELS FTVIGQNDAP YIEPWNSSLE GTVDENDAVS LFSAGSIVYD DVDASDQHYG YINNVSLSGE AGNLNPGSLY GLLRLDDYAS GGALGWTFNA DSGLFDYLQE GESVTLTYDV EVSDGREGGQ TTVSITIEGT NDLPVFNGYS FSLGESEPLW VNLLASVQDV DSDTLTVTDV VAMTNNPDRV VVANVNYADG TVTFPYGQYE DLAAGETETL TIRFNVDDGD GGVVPCELNF TVIGQNDAPY IEPWNSTLEG TVDENDAPVL TTGGTIVFDD VDASDQHYGY INNVTQTGTV GDFNIYDLFG LLRLDDYASG GALGWTFNAD SGLFDYLQEG ESITLTYDVA VSDGREDGQT TVSITIEGTN DLPTFIDFGH QIDESTSLWV NLLSGVQDVD SDAVTISDVV AYTDNPDRVV ALDVNLAEGT VRFPYGQYED LAEGESEILT ISYTIDDGDG GVVPAEMHFT VIGSNDAPYI EPWNSTLEGT VDENDAPVLT TGGSIVFDDV DASDQHYGSI NNVTQTGTVG DFNIYDLYGL LRLDDYASGG ALGWTFNADS SLFDYLQEGE SVTLTYDVEV TDGREGGQTT VSITIEGSND LPSFVDFTIS FGESEPLWVN LLASVQDVDS DTVVVTDVTA HTDNPDRVVV ANVDYEAGTV SFPYGQYEDL AEGETETLTI SFNLEDSDGG VLPREFNFTI IGQNDAPYFE PWNSSLDATA DTGNAGQLEA SGVIGIWDPD ASDEHTGATL SVSLAGDVGG LTEADVLGLL SFDGSRPDAS VDWSFASDST LFAYLSTGEN VTLTYEVEIS DGHDSVTAPV TITITGQNDL PMVSADIAVA THEDAAPLLV DLFANASDPE GDDMAVTGVV VTTASGRTVD FSVDALTGEM VIDPAQFGDL DAGELETLTV SYGIGHADTV ITGGADSIPT IGNAGRWFVV DLDSGQTVQE ARGSGNSAEP FAVPANGVVF HFNGNNADYV IAATAYVDGV ASVIDPAGFE ISGYSGTLYE DGVWLNFADT ISDAMISWTG TIETVDGPRQ VSFTFDGLNF TDNQTGTSTL DSFSVEVSGP RTAAIAVIEV EGRDEGAAME ARVFSKGEVI DVAKVPVADT LTDGDAGSTD GLVTLSHEDA LTVITAADVA DFAFERVFDV TNFRGAVQFA SLTEADDTAM EVDSVQPALG QADAFDLPGL DAFGLPQDDA ALTMPLPEVP EGW
|
| |