Gene Mmar10_1858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmar10_1858 
Symbol 
ID4284740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMaricaulis maris MCS10 
KingdomBacteria 
Replicon accessionNC_008347 
Strand
Start bp2026234 
End bp2027505 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content63% 
IMG OID638141357 
Producthypothetical protein 
Protein accessionYP_757088 
Protein GI114570408 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0460852 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAATCA AGCTGGACCT CAATCCGGAA GAGCGCGCCG TACTCGATTG GATCGATACG 
CGGGCTGACG GCATGATCAA GACCGCAAAG GCCTGGTCTG CCATAAACTC GGGCAGCCGC
AACGCCGATG GCCTCGAAGC CATGCGGGCT GAGCTGGAAA CGGCCTTTGC GGCGACCGGT
GGCGAAATCA GCGCGATCGA GCTGCCGCCA ACGACCGTCG TCGACCCGGA CGGCACGGTG
CGCGAGCAGG CTTTCACGCC AGCCTTCCAT TGCCGGATCC GGCCGCAAGC GCCGATCCGC
ATTGTCATGA CCGGACATCA CGACACGGTT TTTCCGGCGG ATAGTCATTT CCAGGCCACC
GAACTTTGGG ATGACGACAC GCTCAACGGC CCCGGAGTTG CCGACATGAA GGGCGGCATC
CTGGTGATGC TGCACGGTAT TCTCGGCCTC GAGCGTTCGC CCTGGAAAGA CGAGATCGGC
ATTGATGTGC TGATCAGCCC GGATGAGGAA ATCGGCTCGC TGGGCTCCGG CCCGGTCCTC
GCCGAGCTGG GCGCCGGTGC CGATATCGGC ATGACCTATG AGCCGGCGCT GGCCGATGGT
TCGCTGGCCG GAGCGCGCAA GGGCTCGGGC AACTGGTCCC TGAAAGTGTC GGGCCGGGCC
GCCCATGCTG GCCGCGAACA TCATCTCGGT CGCAATGCGC TGGCGGCCGC CTGCCAGTTC
GGCCTCGGGC TGGACGATCT CAATGGCAAG CGCCCGGACG TGACTTTCAA TCTGGCCCGT
ATCGATGGCG GCGGACCGCC GAATGTCGTT CCCGACAACG CTGTTGTGCG GTTCAATGTG
CGGGTCAAGA CCGAGAATGA CCGTGTCTGG GTCGAAGCAG AACTCGAGCG ACTGGTCGAT
GAAATCTGTG TGCGTGACGG GATCGACGCC GAATTGCATG GTGGTTTCAC GCGCCCGCCC
AAACCCATGT CGCCGGCCAA TGCCAAGATG TTCGAATGGA CGCGCGCAGC TGGGACCGCA
CTGGGTCTGG ACATTCGCTG GCAGGATACG GGCGGCGTCT GTGAGGGCAA TAATCTGTGG
GCCGCCGGCT GTCCGAATGT CGACACCCTT GGTGTCCGCG GCGCCGACAT CCACTCGGAT
CGTGAGATCG TCAAACTGTC CAGTTTCGCC GAGCGCGCCA AACTCTCAGC CATTTTGCTG
ATGAAGTTCG CGCAAGGCCA ATTTGACGCG CGGGAAGCGC GCGCGCTGGC AAAGGCCGGC
ACTCAAGATT GA
 
Protein sequence
MQIKLDLNPE ERAVLDWIDT RADGMIKTAK AWSAINSGSR NADGLEAMRA ELETAFAATG 
GEISAIELPP TTVVDPDGTV REQAFTPAFH CRIRPQAPIR IVMTGHHDTV FPADSHFQAT
ELWDDDTLNG PGVADMKGGI LVMLHGILGL ERSPWKDEIG IDVLISPDEE IGSLGSGPVL
AELGAGADIG MTYEPALADG SLAGARKGSG NWSLKVSGRA AHAGREHHLG RNALAAACQF
GLGLDDLNGK RPDVTFNLAR IDGGGPPNVV PDNAVVRFNV RVKTENDRVW VEAELERLVD
EICVRDGIDA ELHGGFTRPP KPMSPANAKM FEWTRAAGTA LGLDIRWQDT GGVCEGNNLW
AAGCPNVDTL GVRGADIHSD REIVKLSSFA ERAKLSAILL MKFAQGQFDA REARALAKAG
TQD