| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_1811 |
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| Symbol | |
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| ID | 4284449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Maricaulis maris MCS10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008347 |
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| Strand | - |
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| Start bp | 1967104 |
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| End bp | 1968894 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638141301 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_757041 |
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| Protein GI | 114570361 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | [TIGR02466] conserved hypothetical protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.541585 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.135887 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGAGA CGCTGCAGCG CGCCGCGGGC CTGCTGCAGG CCGGACGTTT TGGCGAGGCG
CTCACGCTCC TCGACGGGGT CCTCAATACG CAGCCTGACC AGCCCGATGC CCTGATGCTT
CGGGCCATGG CCCGAAGCCG GACCGGAGAT GACAGCGGCG CGGTCAGCGA TTTCCTGGCG
GCAGGTCTTT GTCACCCCCA GCCGCATGCG GTCCACAATA ATCTCGGCAA CCATCATCAG
CGAGCCGGTC GGCTGGACGC TGCGGTGGCG GCGTATCGTG AGGCTTTGCG ATTGGCACCA
GGGTTTGCCG ATGCCCGCAT GAATCTGGCG ATTACCCTGT CTCAAGGTGA GGATTTCGAG
GCCGCGCGGA CGGCGATCAA TGCGGTTCTC GATCAGGCTC CCAATCACGC GTTGCTGCTC
AACGCACTTG GCAATGTCGA GCGGCGCGCC GGGAATCCGG ATGCAGCGAG GCGTGCCTAT
GACGGCGCGA TCGCGGCTGA TCCGCAAGCG GTGCAGCCGC GCATCAATCG CGGCGCATTG
CGGCGTGAAA CGGGGGAGAT CGAGGCGTCC TGTGCGGATT TGCGTGACGC TTGTGGCATG
GCACCAGGTC TGGCCGAGGC CCATGCCCAG CTGGCACACA GCCTTCGCAC CAGTCTCGAT
ATCACCGGGG CCGAGCAGGC CTATCGGCAG GCCCTGGCGC TGGCCCCTGA TGACCCGGGA
TATCACGCTG ACCTGGCCGG CCTTTTGGCG GAGGCAGGGC AGGGCGACAA GGCTCTGACC
ACCTTGCAGG GACGAATCGC GGTGAGCGGC GATCCGCGCC TCTATGAAGT CCTGGCCCGG
CTGCAGATGC GCTCAGGGCG GCCGGAAGCG GCACGGGCGG CGGCGGATGC GGCACTGGCC
CGTGACGCCA GCGCGGTGAA GGCGGCCATG GTCCGCAGCG AGTTGGGGCT TCGTTGTGGC
GATTTGCGAG GTGCGCTGGA GGATGCCCGG TTGGCGTTTG ATGCCAGCGG AGGTGAGGAC
TGGGGCGCCC GCCATGTCCT TGCTGAAGCC CTTCTTGTAA ACGCGGATTG GGAAGGCGCG
ACCGATGTAC TGGTTGGCGA TCCGCCGGCC GCTCACCTGC AAAAACACCT GGCCCTGCAG
TCGGTGGCCT GGCGTCAGAC GGGCAATCCT CGCTACGCCG CCCTTTGCGA TTATGACCGG
TTCGCTCGCA AGATGTGGAT TGAGACGCCG CCCGGATATG AGTCTCTGGC TGCCTTCAAC
GCGGCGCTGT CCGACCGGAT CGAGCGACTG CATGCCGATG GCGCAGCGCC TCTCGAGCAG
ACCCTGTTTG GCGGGACCCA GTCCGCGGGG CGGTTGTGGA ACAATGATGA CCCGGTGATT
CGGGCCCTCG CGACGGCGCT GGAGGGTCTG GCGGCCCGAT ATCTGGCAGA ACTGCCTGTG
GATCCGTCTC ACCCTTTCCT GGCGCGAAAT ACCGGCCGTT CCAGATTGGC CGGGGCCTGG
TCGGTTCGCC TGAGGTCCGG GGGCGGTCAT GTCGACCATG TCCATCCGGC GGGGTGGGTC
AGTGCCAGTT ACTATGTCAG TGTTCCGGCA TCCGTGATGG CCGGCGAGCG GGCCGGCTGG
CTGCGCATCG GGGCTCCGGG CCTTCCTGGG CTGGACCTCC CAGTCGAACG ATATATTCAG
CCAGAACCTG GCTGCGCCAT TGTCTTCCCG TCTTATTTTT GGCACGGCGT CGAGCCATTT
GAGAGTGACG AGGTTCGGGT GACCGCACCG TTCGATCTGC TCCCGGTCTG A
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| Protein sequence | MMETLQRAAG LLQAGRFGEA LTLLDGVLNT QPDQPDALML RAMARSRTGD DSGAVSDFLA
AGLCHPQPHA VHNNLGNHHQ RAGRLDAAVA AYREALRLAP GFADARMNLA ITLSQGEDFE
AARTAINAVL DQAPNHALLL NALGNVERRA GNPDAARRAY DGAIAADPQA VQPRINRGAL
RRETGEIEAS CADLRDACGM APGLAEAHAQ LAHSLRTSLD ITGAEQAYRQ ALALAPDDPG
YHADLAGLLA EAGQGDKALT TLQGRIAVSG DPRLYEVLAR LQMRSGRPEA ARAAADAALA
RDASAVKAAM VRSELGLRCG DLRGALEDAR LAFDASGGED WGARHVLAEA LLVNADWEGA
TDVLVGDPPA AHLQKHLALQ SVAWRQTGNP RYAALCDYDR FARKMWIETP PGYESLAAFN
AALSDRIERL HADGAAPLEQ TLFGGTQSAG RLWNNDDPVI RALATALEGL AARYLAELPV
DPSHPFLARN TGRSRLAGAW SVRLRSGGGH VDHVHPAGWV SASYYVSVPA SVMAGERAGW
LRIGAPGLPG LDLPVERYIQ PEPGCAIVFP SYFWHGVEPF ESDEVRVTAP FDLLPV
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