| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_1778 |
|---|
| Symbol | rpsE |
|---|
| ID | 4284696 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | - |
|---|
| Start bp | 1937339 |
|---|
| End bp | 1937944 |
|---|
| Gene Length | 606 bp |
|---|
| Protein Length | 201 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638141267 |
|---|
| Product | 30S ribosomal protein S5 |
|---|
| Protein accession | YP_757008 |
|---|
| Protein GI | 114570328 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0098] Ribosomal protein S5 |
|---|
| TIGRFAM ID | [TIGR01021] ribosomal protein S5, bacterial/organelle type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0732859 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 0.169541 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCATC AGAACGAGCA ACGTGGTGGC GGTGACCGTG GCCGGGGCCG CGGCCGTGGC
CGGGACCGCG ACCAGGAACG CGATGACGAA CTTGTCGACA AGCTCGTCCA CATCAACCGC
GTCGCCAAGA CGGTGAAGGG TGGCCGGAAC TTCCAGTTCG CAGCCCTCGT CGTTGTCGGT
GACACCAAGG GCCGCGTCGG CTTCGGACAG GGCAAGGCAC GCGAAGTGCC GGAAGCCATC
CGCAAGGCTA CCGACGAAGC CAAGAAGAAC ATGATCCGCG TTCCGCTGCG CGAAGGCCGC
ACCCTGCACC ATGATGGCAA AGGCCGTCAC GGCGCCGGCA AGGTCGTCCT GCGGGCGGCG
CCTCCGGGTA CCGGCGTCAT CGCCGGCGGT CCGATGCGCG CCGTGCTGGA AACCCTCGGT
ATCCAGGACG TGGTCGCAAA GTCGGTTGGC ACGTCCAACC CGTACAACAT GATCCGCGCC
ACCATGGATG CGCTGAAACT GCAGTCGAGC CCGCGCTCGG TTGCCGCCAA GCGTGGTCTC
AAGGTCGGTG ATCTGGTGAA CCGCCGCGAT GACGGCGCGT CCTCACCGGA AGCGATCGAA
GCGTAA
|
|---|
| Protein sequence | MAHQNEQRGG GDRGRGRGRG RDRDQERDDE LVDKLVHINR VAKTVKGGRN FQFAALVVVG
DTKGRVGFGQ GKAREVPEAI RKATDEAKKN MIRVPLREGR TLHHDGKGRH GAGKVVLRAA
PPGTGVIAGG PMRAVLETLG IQDVVAKSVG TSNPYNMIRA TMDALKLQSS PRSVAAKRGL
KVGDLVNRRD DGASSPEAIE A
|
|---|
| |