Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmar10_1692 |
Symbol | |
ID | 4285695 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Maricaulis maris MCS10 |
Kingdom | Bacteria |
Replicon accession | NC_008347 |
Strand | - |
Start bp | 1860045 |
End bp | 1860734 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 638141180 |
Product | ABC transporter related |
Protein accession | YP_756922 |
Protein GI | 114570242 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00000461278 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.0121253 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTACG CGCTCGAGCT CAGCAAGGTT TCAAAGCGTT TTCGGACCAG GAAGGTCGAA ACCCTGGCGC TCGATCAAAT CGATCTGTCG GTTGAAAGAG GCGAGTTCCT GTCGATCGTG GGCTCGTCCG GCTCTGGCAA GTCCACACTG GTCGCCATCA TGGGCCTGCT TGAAAATCCG AGCGAAGGGT CTGTGGTTTT CTTTGGTGAA ACGGTCACTC GCGCGGGATC GGGTCGACTT GCCGATTTGA GGCGAAACCA TATCGGCTTT GTATTTCAGT CGTTTCAACT CATCAGCGAT ATGTCAGTCG TCGAGAATGT GATGGCAGGG CTCGACGGGA TTGAGCGATC GAAACGTCTG CGCCGGGCGC GGGCATTGGA GACACTGGAC GCCTTGGGCA TTGCTCACAG GGCAGATCAT TTGCCTTCCC AACTCTCCGG CGGCCAACAA CAGCGTGCCG CCGTGGCCCG CGCCATGGTT CGCAAACCTC TCCTGCTGAT CTGTGATGAA CCAACGGGGA ATCTGGATCC GGAGTCGGCA GACATTGTCA TGGCTCATAT CGAAGCGTTT CGTGACGCCG GTGCCACCGT GGTCCTCGTC ACCCATGATC CGGCCATTGC CAGACGGGCG GACAGAATCG TCACGCTTGA ACACGGGCAG CTGCAGCCCG GGCCTGTCGC GTCTTCCTGA
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Protein sequence | MSYALELSKV SKRFRTRKVE TLALDQIDLS VERGEFLSIV GSSGSGKSTL VAIMGLLENP SEGSVVFFGE TVTRAGSGRL ADLRRNHIGF VFQSFQLISD MSVVENVMAG LDGIERSKRL RRARALETLD ALGIAHRADH LPSQLSGGQQ QRAAVARAMV RKPLLLICDE PTGNLDPESA DIVMAHIEAF RDAGATVVLV THDPAIARRA DRIVTLEHGQ LQPGPVASS
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