Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmar10_1485 |
Symbol | |
ID | 4284542 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Maricaulis maris MCS10 |
Kingdom | Bacteria |
Replicon accession | NC_008347 |
Strand | - |
Start bp | 1627679 |
End bp | 1631197 |
Gene Length | 3519 bp |
Protein Length | 1172 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638140968 |
Product | transcription-repair coupling factor |
Protein accession | YP_756715 |
Protein GI | 114570035 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1197] Transcription-repair coupling factor (superfamily II helicase) |
TIGRFAM ID | [TIGR00580] transcription-repair coupling factor (mfd) |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.432425 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGACTG AGACAACAAG CGGAGTTTCT GAGCTCGAAA TGATCGCCGC CGTTCACGGG ACGGCGACCG TCTGCGGTGC GCCGGAAGGT CTGGACGCTC TGGTCTTTGC CGATACGGCG CGCCTGCGTG GCGGCGTCAA TGTGTTCATT GCACGCGATG ATTCGCGGGC AGCGGCCTTT GTCGCGGCGC TGCAGTTTTT CGCCCCCGAT ATTGAATTGC TGCGCCTGCC GGCCTGGGAC TGCCAGCCCT ATGACCGGAT CTCGCCAAGC CCGCGCGTTG CCGCACGTCG GGCTGCGACA CTTGCCAAGC TTGCCTCCGG TGAGTTGGGC CCGGCCACGC TGGTCGTCAC TACCGTCAAT GCCATGGCGC AACGCTGCCC GCCGAGATCG GTGCTGCAGG ACTCCGGCCT GTCGATCCGG CCGGGCGCCA GCGTCGATGT GGACGTGCTG GTCCGCCACT TCACCGCCAA CGGGTATTCG CGCGCCGCAA CCGTCATGGA ACCGGGTGAT TTCGCGGTCA GGGGCGGGGT TGTCGATGTC TATCCGCCCG GGGCGACCGA GCCGGTACGC CTTGATTTCT TCGGTGATAC GCTTGAATCG ATCCGGGCCT TCGATCCGGA GACACAACGA TCCCTGCGCC AGATCAAGTC GATCGAGTTC ACGCCGGTCA GCGAAGTCCT GCTCGACGAG GACAGCGTGT CCCGCTTCCG GTCCGGCTTC GTGAAGACTT TTGGAGCGTC GCGCGGCACT GACCCGGTTT ATGAATCGGT CAGTGCGGGT GCGCGGCCGG CGGGTGTCGA GCACTGGATG CCGCTCTTTT ATGAGCGTCT CGACACGCCG TTCGACTATC TGCCGGACCA GAGCCTGATC GCCGTTGATC ACCTTGCCCA TGAAGCCCTC GACGAGCGTC TGAGCCAGAT TGCCGACTAT TACGATTCGC GGATTGCAGC GGGCGAGACC CGTCATGAAT CGGCCCTGTC GGCGCCGACC TATCGTGCCT TGCCGGCGGA CGCTCTTTAT TTTGCCGACG GCGAATGGGA CACGGCTTTG GCGGACCGGC CAGTACGACG CTATACCGCT TTCCGCGAAC CGGGCCCGCA AACCATTGAT GTCGCCGGCA AGCAGGGACG CGGTTTTGCC GCCGAGCGTG CCGCCGAGAA CACCAATGTC TTTGACGCAG TGGCGGCTCA TATCAAGTCG CTTTCGGCAT CGGGCAAGAC CGTCATGCTG GCTTCCTGGA CCGGCGGCGC GTCGGAACGC CTGGCCAGCG TGCTGGGCGA TCACGGCATC TCTCGTATCC CCTTGCTCGA CAAATGGTCG GATGTGCCCG CCGGCGGCAA GGGCGGCGTG TGCCGCGCCG TGCTGCCGCT CGAGCGGGGC TTCGAAACCG ATACCCTGGC CGTGCTGTCG GAACAGGACA TTCTCGGTGA CCGCCTGGCC CGTCCGCGCA AGAAGCGCAA ATCGGCCGAT ATCATCGTCG AGGCCGGCTC CCTGTCGCCC GGCGATCTGG TCATCCATGC CGATCACGGG CTCGGCCGCT TCATCGGTCT GAAGACCCTG CCGGTGCAGG ACGCGCCGCA TGATTGTATC GAGCTGGAAT ATTCCGGCCA GGCCAAGCTC TACCTGCCGG TCGAGAATAT CGAGCTTTTG TCGCGCTATG GCGCCGAATC CGAAACCGCC CAACTCGACA AGCTTGGCGG CGTGGCCTGG CAGGCGCGCA AGGCGAAAGC CAAGAAGCGC CTGCGCGACA TGGCCGACCA GCTGATCAAG ATCGCGGCGG AACGCCTGGC CCGCAAGGCC GAACCGATCG AGACGTCCAG CGGTGCCTTT GACGAATTCT GTTCGACCTT TCCCTATCCG GAGACGGATG ACCAGCTGAA CGCCATCGAC GACGTGCTGA CCGACCTGGG TCGCGGTCGC CCGATGGATC GTCTCATCTG CGGGGATGTC GGCTTCGGCA AGACCGAGGT TGCACTTCGG GCCGCCTTTG TGGTTGCGCT CAGTGGCCAG CAGGTCGCGA TCGTGGCGCC GACAACCCTT TTGGCGCGCC AGCATTTCAA GACGTTCAGC GACCGTTTCC GCGGCTGGCC GGTGAAAGTC CGGCTGCTGT CGCGTCTGGT GACAGCCAAG GAAGCCAAGG CGACACGCGA CGAGTTGGCG GCCGGCCAGG TCGAGATCGT GATCGGCACC CACGCGCTGC TGGCCAAGAC CGTGAAATTC CGCGACCTCG GCTTGCTGGT GGTCGATGAG GAGCAGCATT TCGGCGTCAA GCACAAGGAA CGTCTCAAGG AGCTGCGGTC CGACGTGCAT GTGCTCACCC TGACCGCGAC GCCCATTCCG CGGACGCTGC AACTGGCCCT GACCGGCATT CGCGACCTGT CGATCATCGC CACACCGCCG GTCGACCGCC TGGCCGTGCG CACCTATGTC GCGCCGTTCG ATCCGGTCAG TGTTCGCGAA GCACTCCTGC GGGAGAAATA CCGGGGCGGG CAGGCCTTCT TTGTCGTGCC ACGGATCACC GATCTGGAAG AAACCACCCG TTTCCTGCGC GAGAGCGTGC CGGAAGTGAG TTTCGTTGCC GCGCATGGCC AGATGGCGGC GTCCCAGCTC GAGGACATCA TGACCGCCTT CTATGAGGGC CGCTATGACG TCCTCCTGTC GACGACGATC GTGGAGTCCG GCATCGACAT CCCGACTGCC AACACGCTGA TTATCCATCG GGCTGACCGG TTCGGCCTGT CCCAGCTTTA TCAGCTGCGC GGCCGGGTCG GACGCTCCAA GACGCGGGCC TATGCCTATC TGACAACGCC GATGCGCCAG AAGATCACCG AGAGCGCTGA AAAGCGCCTG AAGGTGATGC AGTCGCTGGA CTCGCTGGGT GCCGGTTTCA CGCTGGCCTC CCACGATCTC GATCTGCGTG GCGGCGGCAA TCTGCTGGGC GAAGAACAGT CCGGTCATAT CCGTGATGTC GGCGTCGAGC TCTATCAATC CATGCTGGAA GAGGCGGTCG CCTCCCTGCG CTCTGGTGGC GATGAGCTTG AGGAGGGCGA TTGGTCGCCG CAGATCAATG CCGGCGGGGC GGTGTTGATC CCGGATCATT ATGTTCCGGA CCTTGATGTC CGCCTGCAGC TGTACCGGCG CCTGTCATCC CTGGACAACA AGACCGAACG TGAAGGCTAT GCCGCCGAAC TCATCGACCG TTTCGGCCCC CTGCCCAAGG AAGTCGAGAC ACTGCTGCGA GTCGTGGCGG TCAAGGCGCT GTGCAAGAAG GCCGGGATCG AGAAAGTCGA TGCCGGTCCC AAGGGCGCGG TCATCCACTT GCGCAATGAC CGTTTCGCCG ATCCGGCCGG TCTGGTGGCG CACATCTCCG CCAATCCGGC CCTGTTCAAG GTCCGACCGG ATCTCAAACT GGTGCTGCGG GCCGAATGGG ATGAGCCGGA GGATCGCCTG CGCGCCATCG AGCGAGCCAT TGCGCCACTG GCCGAGATGG CCGTGAAAGC CAAACAGTTG GAAGCCTGA
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Protein sequence | MATETTSGVS ELEMIAAVHG TATVCGAPEG LDALVFADTA RLRGGVNVFI ARDDSRAAAF VAALQFFAPD IELLRLPAWD CQPYDRISPS PRVAARRAAT LAKLASGELG PATLVVTTVN AMAQRCPPRS VLQDSGLSIR PGASVDVDVL VRHFTANGYS RAATVMEPGD FAVRGGVVDV YPPGATEPVR LDFFGDTLES IRAFDPETQR SLRQIKSIEF TPVSEVLLDE DSVSRFRSGF VKTFGASRGT DPVYESVSAG ARPAGVEHWM PLFYERLDTP FDYLPDQSLI AVDHLAHEAL DERLSQIADY YDSRIAAGET RHESALSAPT YRALPADALY FADGEWDTAL ADRPVRRYTA FREPGPQTID VAGKQGRGFA AERAAENTNV FDAVAAHIKS LSASGKTVML ASWTGGASER LASVLGDHGI SRIPLLDKWS DVPAGGKGGV CRAVLPLERG FETDTLAVLS EQDILGDRLA RPRKKRKSAD IIVEAGSLSP GDLVIHADHG LGRFIGLKTL PVQDAPHDCI ELEYSGQAKL YLPVENIELL SRYGAESETA QLDKLGGVAW QARKAKAKKR LRDMADQLIK IAAERLARKA EPIETSSGAF DEFCSTFPYP ETDDQLNAID DVLTDLGRGR PMDRLICGDV GFGKTEVALR AAFVVALSGQ QVAIVAPTTL LARQHFKTFS DRFRGWPVKV RLLSRLVTAK EAKATRDELA AGQVEIVIGT HALLAKTVKF RDLGLLVVDE EQHFGVKHKE RLKELRSDVH VLTLTATPIP RTLQLALTGI RDLSIIATPP VDRLAVRTYV APFDPVSVRE ALLREKYRGG QAFFVVPRIT DLEETTRFLR ESVPEVSFVA AHGQMAASQL EDIMTAFYEG RYDVLLSTTI VESGIDIPTA NTLIIHRADR FGLSQLYQLR GRVGRSKTRA YAYLTTPMRQ KITESAEKRL KVMQSLDSLG AGFTLASHDL DLRGGGNLLG EEQSGHIRDV GVELYQSMLE EAVASLRSGG DELEEGDWSP QINAGGAVLI PDHYVPDLDV RLQLYRRLSS LDNKTEREGY AAELIDRFGP LPKEVETLLR VVAVKALCKK AGIEKVDAGP KGAVIHLRND RFADPAGLVA HISANPALFK VRPDLKLVLR AEWDEPEDRL RAIERAIAPL AEMAVKAKQL EA
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