| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_1356 |
|---|
| Symbol | |
|---|
| ID | 4285058 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | + |
|---|
| Start bp | 1485480 |
|---|
| End bp | 1486046 |
|---|
| Gene Length | 567 bp |
|---|
| Protein Length | 188 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 638140838 |
|---|
| Product | NADH dehydrogenase subunit B |
|---|
| Protein accession | YP_756586 |
|---|
| Protein GI | 114569906 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0377] NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases |
|---|
| TIGRFAM ID | [TIGR01957] NADH-quinone oxidoreductase, B subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.118865 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.0381949 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCATCTG ATCTCACACC TCATGCCGGC ATGGCCGGAC GCGCGACCGT CCCGGGCTAT
GACCCCAAGA AGCACGACCC GTTCTTCGAC GGTGTCAGCG ATGCGCTGGC CGACAAGGGA
TTCGTGGTTG CGGCTGCCGA TGATCTTGTC ACCTGGGCCC GCACCGGCTC CCTGATGTGG
ATGACCTTTG GTCTGGCCTG CTGCGCCGTT GAAATGATGC AGGCCTCGAT GCCGCGTTAT
GATGTCGAGC GCTTCGGTTT TGCGCCGCGG GCCTCCCCGC GCCAGTCCGA CGTGATGATC
GTCGCCGGCA CATTGACCAA CAAGATGGCT CCGGCCCTGC GCAAGGTCTA CGACCAGATG
CCCGAGCCGC GCTACGTCAT CTCGATGGGC TCATGCGCCA ATGGCGGCGG CTATTATCAC
TACTCATACT CGGTCGTGCG TGGCTGCGAC CGCATCGTTC CGGTGGATAT CTATGTCCCG
GGCTGCCCGC CGACCGCGGA AGCCCTGGTC TATGGCATTT TGCAATTGCA AAAGAAGATC
CGCCGCGAAG GCTCGATTGA GCGCTAG
|
|---|
| Protein sequence | MASDLTPHAG MAGRATVPGY DPKKHDPFFD GVSDALADKG FVVAAADDLV TWARTGSLMW
MTFGLACCAV EMMQASMPRY DVERFGFAPR ASPRQSDVMI VAGTLTNKMA PALRKVYDQM
PEPRYVISMG SCANGGGYYH YSYSVVRGCD RIVPVDIYVP GCPPTAEALV YGILQLQKKI
RREGSIER
|
|---|
| |