Gene Mmar10_1323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmar10_1323 
Symbol 
ID4286892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMaricaulis maris MCS10 
KingdomBacteria 
Replicon accessionNC_008347 
Strand
Start bp1441345 
End bp1442397 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content57% 
IMG OID638140802 
Productdiguanylate cyclase 
Protein accessionYP_756553 
Protein GI114569873 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.134516 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.420197 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGGTC GACTGCTTGG CAAAGAAGGA CGTGAGTTCG CGCTCAAGGC GCTGGATCTC 
ATGGATCAAT TCGGCGTAGC GCCGACCCCG GAAAACTATT CCGTGTGGGT CTGCTTCGCC
AGCGACACCA ATCCAGAGCT TTGTGAAACA CTCAAGAACC ACATCGAATC GGGCGGCGAT
TTCTCGGAAA CCGTCAACAA CGAATTGTTC GAACAGTACT TCCAGTGGAA AGCCATCCAG
GATGCTATTC TGGAAAGCGG CGGCGTCATG TGCCGCGAAC TTGGCGCTGT TCAGGAAACA
CTTGAAGCGG CCGAGCGCGA CACCGCTGCC TATGGGAAAG CTCTGGAAGG TGCGAGCCAC
GAGCTGACCG CAACTCCGGA CGCACCGGGC ATGAAAAAAC TTGTCGAGAG CCTTGTCTCA
GCGACCGCCC GCATGCAGCG TCGCAGCCAG GCCCTCGAGG ACCGCTTGCA GGCGACCTCG
AACGAAGTCA CCCAGCTTCG GACCAATCTG GAAAAAGTCC GTGAAGAAGC GATGACGGAT
GCCCTCACCG GCATTGCCAA TCGCAAGCGT TTTGACGAAT CCCTGCGCCG CGCCCGCCGC
GACGCGGATA CCAAGAAACA GCCGCTCAGC CTGATTCTTT GCGATATCGA TTTCTTCAAG
CGCTTCAACG ACACCTGGGG CCATCAGACC GGCGACCAGA TTATTCGCTT TGTAGCCGGC
TGCCTGACCC GACATGCTGG CGAAAATCAC CTTGTCGCCC GATATGGTGG TGAGGAGTTT
GGAATCGTGA TGCCGAACAC CGCACCGAAT GTCGCCGAAC AGGTTGCCGA AAAAATTCGC
AAGACCGTTG AGTCGAAAAA ACTTCTTCGC AAATCGACCA ATGAAGACTT GGGCAATATC
ACCGTTTCTC TCGGGATCGC GACCTATCAC GAAGGCGAAT CGATCGAGGA ACTGATTGAA
CGCTCGGACA CCAATCTTTA CCGATCCAAG ACCGAAGGGC GCAACCGGAC CACGGTCGAC
AACAGCCGCG CCCCGTCTCG CAGCGCGGCC TGA
 
Protein sequence
MNGRLLGKEG REFALKALDL MDQFGVAPTP ENYSVWVCFA SDTNPELCET LKNHIESGGD 
FSETVNNELF EQYFQWKAIQ DAILESGGVM CRELGAVQET LEAAERDTAA YGKALEGASH
ELTATPDAPG MKKLVESLVS ATARMQRRSQ ALEDRLQATS NEVTQLRTNL EKVREEAMTD
ALTGIANRKR FDESLRRARR DADTKKQPLS LILCDIDFFK RFNDTWGHQT GDQIIRFVAG
CLTRHAGENH LVARYGGEEF GIVMPNTAPN VAEQVAEKIR KTVESKKLLR KSTNEDLGNI
TVSLGIATYH EGESIEELIE RSDTNLYRSK TEGRNRTTVD NSRAPSRSAA