| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_1256 |
|---|
| Symbol | |
|---|
| ID | 4283797 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | - |
|---|
| Start bp | 1367992 |
|---|
| End bp | 1368615 |
|---|
| Gene Length | 624 bp |
|---|
| Protein Length | 207 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638140735 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_756486 |
|---|
| Protein GI | 114569806 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.000259056 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACCGGGA TGCTTCGAGA CGGCCTGTTT GATGGCTCCA ACCCGAATGT CGGTGTGACG
GCCAGGACCG GCACCACCAA GGCGCGGATC GAGCGCGCCG CGCTGCAGCT GTTTGCCAGC
CACGGCATGG ACGGGGTTTC GATCAAGCAG ATCGCCGAGG CCTGCACGAT TTCGGACGGC
GCCATGTATC GCCATTTCAA GTCCAAGGAC GCGCTGGCCC GCCTGATGTT TGAGGCCATC
CACAAGAAGC TGCTCGACAT GGTCGCCGGC CATCTGACCC CGGAGGCCTC GCTGGAAGAC
ATCTCCCGCG CCCTGGTCAC GGCCTATTGC AATCTGGCCG ATGAAGACCC GGCGCAATTC
ACCTACCACC TCACCCACCG CAACTATTTC ATTGCCGCGT CAGGCGATGG CGGGGCGGAC
CCGTCGGATC TGATGACCGA TTGCATCGCC CAGGCGATGG AGCGCGGCGA GATTCCCGAA
GGTGATCCGG AGTTGCGCTC AGCCATGGCG CTGGGCGTGG TGATGCAGGC GGCCGAGTAC
AGCCTCTATG GCCGGATCGA CCGTCCGCTC TCCCAGCATA TCGACCAGTT CACCCGCGGC
ATCATGGCCG TGCTGCGCTC GTAA
|
|---|
| Protein sequence | MTGMLRDGLF DGSNPNVGVT ARTGTTKARI ERAALQLFAS HGMDGVSIKQ IAEACTISDG
AMYRHFKSKD ALARLMFEAI HKKLLDMVAG HLTPEASLED ISRALVTAYC NLADEDPAQF
TYHLTHRNYF IAASGDGGAD PSDLMTDCIA QAMERGEIPE GDPELRSAMA LGVVMQAAEY
SLYGRIDRPL SQHIDQFTRG IMAVLRS
|
|---|
| |