Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmar10_1146 |
Symbol | |
ID | 4285710 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Maricaulis maris MCS10 |
Kingdom | Bacteria |
Replicon accession | NC_008347 |
Strand | + |
Start bp | 1254580 |
End bp | 1255851 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638140626 |
Product | threonine dehydratase |
Protein accession | YP_756377 |
Protein GI | 114569697 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1171] Threonine dehydratase |
TIGRFAM ID | [TIGR01127] threonine dehydratase, medium form |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0807272 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.0946601 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCTAA CTGCCCGTTC GACAGCCCCT TTGCCAGACT GCCCACCGCA AGAAGCCACC GCGCTGTCTG CTGCGTTCGA CCATGTCGAC ACGCTGCGGC GGGACGGGTT TGGCGGCATT CTGCGTGCCC CGATGGTCGC ATCGCCGGTC CTGTCGGCGA GCGCGGGATG CGACCTGTGG GTCAAGCTGG AAAACCTTCA GGTCACCGGC TCGTTCAAGG AGCGCGGCGC GTTTGCCCGC ATGGCCGCCC TCAGTGCGGA TGAGCGCCGC AGGGGCGTTG TCGCGGCGTC GGCGGGCAAT CATGCCCAGG GTGTGGCACG CAGCGCCGGG GCGATGGGTA TAGCGGCCCG GATCTACATG CCGGTGGGAA CGCCGACCGT GAAGGTCAAT GCGACCCGCG CCCTGGGCGC TGAGGTCGAG TTGGCCGGCG ATGATTTTGA TGCGGCCAAG GCGCTTGCTG TCGCCGCAGC CGAGACCAGC GGTGCCGTCT TCATCCACCC CTTCGATGAC CCTGTCGTGC TGGCCGGGCA GGGAACGGTG GCGATGGAAA TGCTGGAGGA CCAGCCCGAC CTCGACGTGC TGGTCTTCCC GGTCGGCGGC GGCGGGCTGG CGGCGGGCGC CGGGCTGGCG GCGCGGCGGA TCAAGCCGGA CATCGAACTG GTGGGTGTGC AGTCCGACCT TTTCCCGGCC TTTGCCAATC TCTTTCACGA CGCCGACCGG CCGGTCGGTG GTTTCACCCT CGCTGAAGGC ATTGCCGTGC GTCAGCCCGG TGATCTGACC AGCGCGATAT TGAAGACCCT GCTCGATGAT GTCCTGCTGG TGGACGAGCG CCAGATCGAG CACGCGCTCA ATCTCTTCAT CGCGCAGATG CGGGTCCTGC CGGAAGGGGC GGGCGCTGTC GGGCTTGCTG CCGTCCTCGC CCACAAGCAA CGCTTTGCCG GCAAGAAGGT CGGCCTCGTC CTGTCCGGCG GCAATGTCGA TACAAGGCTC TTGTCATCGC TCCTGCTGCG CGACCTGGCC CGATCGCGCC GGCTAGCCCG CTTCCGCATC GAGCTGGTCG ATATTCCCGG GCAGTTGTCG AGCGTGTCGG AGATCATCTC CGAGGCCGGT GGCAATGTCA CCGATGTCGC CTATCACAAG ACATTCTCGG ACCTGCCAGC CAAGGTGACC TATATCGATA TCTCGCTGGA GGCGCAGGAT GGCGCCCATA TGGACCGGAT CCAGGCGGCC CTGCAGGCGG CCGGCTTCCG GGTCGAACTG GCGGGCTACT GA
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Protein sequence | MSLTARSTAP LPDCPPQEAT ALSAAFDHVD TLRRDGFGGI LRAPMVASPV LSASAGCDLW VKLENLQVTG SFKERGAFAR MAALSADERR RGVVAASAGN HAQGVARSAG AMGIAARIYM PVGTPTVKVN ATRALGAEVE LAGDDFDAAK ALAVAAAETS GAVFIHPFDD PVVLAGQGTV AMEMLEDQPD LDVLVFPVGG GGLAAGAGLA ARRIKPDIEL VGVQSDLFPA FANLFHDADR PVGGFTLAEG IAVRQPGDLT SAILKTLLDD VLLVDERQIE HALNLFIAQM RVLPEGAGAV GLAAVLAHKQ RFAGKKVGLV LSGGNVDTRL LSSLLLRDLA RSRRLARFRI ELVDIPGQLS SVSEIISEAG GNVTDVAYHK TFSDLPAKVT YIDISLEAQD GAHMDRIQAA LQAAGFRVEL AGY
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