| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_0901 |
|---|
| Symbol | |
|---|
| ID | 4284066 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | + |
|---|
| Start bp | 995641 |
|---|
| End bp | 996765 |
|---|
| Gene Length | 1125 bp |
|---|
| Protein Length | 374 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 638140369 |
|---|
| Product | response regulator receiver sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_756132 |
|---|
| Protein GI | 114569452 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0602893 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.0705062 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCGACC CCGCAACCGG AGCACTTGCG TTGGAGACAA ACCCCGCCGG CTCGGAGCCC
AGACGCTTCC TGATCATCGA TGATGACGAC CTCGACCGGA TGGTGATCGA GCGCAAGCTG
GGTCAGATGG AGCCGGGAGC GGTGTGTTGC CATGCGGCGA CCGCGGATGC CGCGCTTCGC
CTGGTCGCCG AGGATCCGGC TTTTGACGCA GCTTTTGTTG ATTTCGCCAT GCCGGACGAG
GACGGGCTGA GTACCATTCG CGCGCTGCGC CGGCAAAAAG CGCTTGAGCT GGTGCCGGTG
ATCATGGTCA CCGGAAGCGC AGACCCGGTG CTGGCCGCGT CGTCCATTAT CGAGGGAGCG
GATGCCTATC TGAGCAAGGA GGACATGACC GATTCGCGGT TTGCCTGGGC ATTGGTCAGT
GCGTCCGAGC GGGCGAGATT GCGCCGGGAG GCCCGGGCCA AGGAAATCGC GATGCGTGAA
TTTGCGTTCA ACGCGGCTCA TGACCTCAAA TCGCCGCTGA ACGGTATTAC CGGCTTTGCC
GCCCTGCTGG CAAAAGCCGT CGATGACGTA TCTCCCCAGG CCCGGGAGTT CGCTTCAAAA
ATCCGGACCC AGGGCCTCAA GATGGCAGAG ATGATCGACT CGATGCTGGA CTACGCGATA
GCCGGTGAAG CGATCGGCGA GACCCCGGTC GTCGCCCTGC AGGATGTCGC CGATGATGCC
GTCGCTTCGA CCCGGGCTGA GCTGGACGCG ATCGCCGCCA GCATTCGTGT GAGCGTGACC
GGACAGGCGC CCATGGATCG CATCCAGATC GAGCGCGTCT TGCGCAATCT CATTCTGAAC
GCGGTCAAAT ACCGGGCATC TGCAATCCCC GAAATAGCGA TCCGAACCCG CCACGTTGCG
GGCACCCTGG CGGTCGAGGT CGCCGACAAC GGAGTGGGCG TTCCGTCCGA TCTCCGGGAC
CGGATATTCG AACCCATGCA GCGTGCCCAT CACCAATCGG TTGACGGGCA CGGTCTGGGG
CTGGCGATTT CCCGCAAGAT CATCAATGCC CATGGCGGCC GGATCTGGTG CGAGGCAAGA
CCCGGCGGCG GTAGTCTGTT TACCTTCACC CTGCCCGAGG CCTGA
|
|---|
| Protein sequence | MIDPATGALA LETNPAGSEP RRFLIIDDDD LDRMVIERKL GQMEPGAVCC HAATADAALR
LVAEDPAFDA AFVDFAMPDE DGLSTIRALR RQKALELVPV IMVTGSADPV LAASSIIEGA
DAYLSKEDMT DSRFAWALVS ASERARLRRE ARAKEIAMRE FAFNAAHDLK SPLNGITGFA
ALLAKAVDDV SPQAREFASK IRTQGLKMAE MIDSMLDYAI AGEAIGETPV VALQDVADDA
VASTRAELDA IAASIRVSVT GQAPMDRIQI ERVLRNLILN AVKYRASAIP EIAIRTRHVA
GTLAVEVADN GVGVPSDLRD RIFEPMQRAH HQSVDGHGLG LAISRKIINA HGGRIWCEAR
PGGGSLFTFT LPEA
|
|---|
| |