Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmar10_0584 |
Symbol | |
ID | 4286872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Maricaulis maris MCS10 |
Kingdom | Bacteria |
Replicon accession | NC_008347 |
Strand | + |
Start bp | 675413 |
End bp | 676300 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638140049 |
Product | RNA polymerase factor sigma-32 |
Protein accession | YP_755815 |
Protein GI | 114569135 |
COG category | [K] Transcription |
COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.114197 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.000584555 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCCAATG CAGTTTCAAT GACGCTCTCA CCCGAACAGG GGTTGTCGAG CTATCTGTCG GAAATCCGTC GTTTTCCAAT GCTGGAAAAG GACGAGGAAT TCATGCTGGG CAAGCGCTGG CGTGAGCACG AGGATGGCGG CGCCGCGGAA AAGCTTGTCA CTTCCCATCT TCGCCTCGTG GCCAAGATCG CCATGGGCTA TCGCGGCTAT GGCCTGCCGA TCGCCGAAGT GATCTCCGAA GGCAATGTCG GCCTGATGCA GGCGGTCAAG AAATTCGATC CCGACAAGGG CTTCCGCCTG GCGACCTACG CCATGTGGTG GATCCGCGCC TCGATCCAGG AATACATCCT GCGTTCGTGG TCGCTGGTGA AAATGGGCAC GACGGCGGCC CAGAAGAAGC TGTTCTTCAA CCTGCGCCGG ATGAAAAGCC AGATGCAGGC CCTTGATGAG GGTGATCTCA AGCCGGACCA GGTCGAGGCC ATCGCCACCA AGCTGGGCGT CACCAATGAC GAGGTGATGT CGATGAATGG TCGCCTGTCC GGTCCCGACG CCTCACTCAA CGCGCCGCTG CGCGGTACCG AGGGCGAAGG TCAGTGGCAG GACTGGCTGT CCGACGACAC GGCTGAAAGC CAGGAAGACG AGCTGGCCGA GAGCGACGAG TTCGACACCC GGATGCAATT GCTGCAATCG GCGATGGGCG AGCTCAATGA GCGCGAGCAG CACATCTTGC AGGAGCGCCG GCTGTCGGAA GACCCGAAAA CCCTGGAAGA ACTGGCCGAG CATTACGGCG TCAGCCGAGA GCGTATCCGC CAGATCGAGG TGCGAGCCTT TGAAAAGCTG CAAAAGGCGA TGAAAGCCAT GGCCAGCGAA CAGGGCCTGA TGAACTAG
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Protein sequence | MANAVSMTLS PEQGLSSYLS EIRRFPMLEK DEEFMLGKRW REHEDGGAAE KLVTSHLRLV AKIAMGYRGY GLPIAEVISE GNVGLMQAVK KFDPDKGFRL ATYAMWWIRA SIQEYILRSW SLVKMGTTAA QKKLFFNLRR MKSQMQALDE GDLKPDQVEA IATKLGVTND EVMSMNGRLS GPDASLNAPL RGTEGEGQWQ DWLSDDTAES QEDELAESDE FDTRMQLLQS AMGELNEREQ HILQERRLSE DPKTLEELAE HYGVSRERIR QIEVRAFEKL QKAMKAMASE QGLMN
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