Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmar10_0381 |
Symbol | |
ID | 4285533 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Maricaulis maris MCS10 |
Kingdom | Bacteria |
Replicon accession | NC_008347 |
Strand | + |
Start bp | 455235 |
End bp | 457187 |
Gene Length | 1953 bp |
Protein Length | 650 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638139844 |
Product | general secretion pathway protein D |
Protein accession | YP_755612 |
Protein GI | 114568932 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1450] Type II secretory pathway, component PulD |
TIGRFAM ID | [TIGR02517] general secretion pathway protein D |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.693227 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.206619 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCAGT TTGCGAAAAA CGCCCTGGCC GCCCTGTGTG TGCTGTCTGT CCTCGTGCTG GCGCCGATGG CCCGCGCCCA GGACCAGGTG GTCAATTTCA ACCAGGCCGA GATCCAGGCG GTCATCGATG ATGTCTCGGC GGTGACCGGA TACACTTTCA TCGTTGATCC GAATGTACGC GGTCGGGTGA CCATCACCTC GCAGGCGCCG CTGACCTCGG ACCAGTATTT CCAGGTCTTC CTGTCGACCA TGCGGGTGCA TGGCTACACC GTGGTGCCGA CCGCGTCGGG GGCCTACCAG ATCGTCCCGG ACCAGGCCGG CGCCCGCTCC GCCAATCCGG TCAATTCCAA CCTGCGTGGC GACCAGTATG TGACCGCCGT CGTGCGTCTG AACCATGTCG CCTCGCGCGA TGCGCTCGCC GTGGTGCGGC CCCTGATCGG TGCCCAGGGC AGCGTCAATG CGACCGAGAC CGGCAATGTG CTGGTGATGG TCGACTATGC CGAGAACATC GCCCGCCTGC GCCAGGTCAT CCGCGATCTC GACCGTGACA CCTCGGTGGT GGAAATGGTC GAGCTGACCA ATGTCTCGGC CGGCGACATG ACACGCATCC TGCAACAGAT GCGGACCAGT TCGACGGCGG GCGAGGACGA GACCATTTTC AACGTTGCCA TCGCGCCGAT CCCGGCTTCC AACACCGTCC TGCTGCGCGG CAATCGTGAC GCCGTTGACC GCATGATTGC CCTGGTGCGC CGGGTCGACA GTGTCAGCCA GTCGAACCGG AGCTTCCGCG TCATCTATCT CAGCCATGCC GATGGCGAGC ATTTGCTGCC GATCCTGCAG CAGGTGGTCG ACACCCTGGT GGCAGGTGAG GGAACGACGC GCGCCCCGTC AGTCTCGCAC CATGCCCCCA CCAATGCGCT GGTCATCAAT GCCGATCCGG ACGTGCAGCG CCAGCTCGAA CTGGTGATCC GCCAGCTCGA CATCCGCCGG CCGCAAGTGC TGGTCGAGGG CATCATTGTC GAGATGTCCG ACAGCACGGC CCGCGAACTC GGCGTGCAGA TGCTGCTGGC CGGTGGTGAG GGCGACACGC CTTTGGCAAT GACCCGCTTC TCCTCCAACA ATCCCGACCT GCTGGCCCTG ACCGGAGCCG CGACCTCGCC CGGCGATGAT GACAGCGATC TCAATGTGTC GCTGCGCGAT GCGGCGATCA ATTCGCTGCT TGGTGCCTCG GGTGGCACGC TGGGCTTTGG CGGCCAGAAC GGCAGCGGCA ACCTGTTCGG CCTGGTCCTC AACGCGGTCG AAAGTGACGT CAATTCCAAC GTTCTGGCCA CGCCCTCCAT CATGGCGCTG GACAATGAGG AAGCCTATTT CCTGTCCGGT CAGGAAATCC CGGTGACCAC CGGCGAGGCG CTTGGCTCGA ACAACACCAA CCCGTTCCGG ACGGTTGACC GCGAAGAGGT CGGTGTGAAG CTGACCGTCC TGCCGCAGAT CACCGAGGGC AATACGGTGC GTCTGCACAT CGTGCAGGAA GTCTCCTCGG TGGCGGGTGC GGTCAATGCC GGCTCGTCCG ACCTGATCAC CAACAAGCGT GAAATCTCGA CGACGGTGCT GGCCGATAAT GGCGAGATCA TCGTGCTGGG TGGCCTGATC CAGCAGGAAG ACGAGATCAG CGAGGACGGC GTGCCGGGCC TGCGTCGCCT GCCCGGCGTC GGTCGCCTGT TCCGCTCGGA GGGCTCCACC ACCCGCCGCA CCAATCTGAT GGTCTTCATC CGTCCGACCA TCATCCGCTC AGAGGCCGAC ATGCAGGCCC TGACCGACAA TCGTTATGAC TTCATCCGCA ATGAGCAGAT CGCCGGCAGC CCGAACGGGA CCAGCTCGCT GGAATCGATT GTCGAGATGA TGCTGGTCGA GATGGATGCG CCTGTCGCCA CAGCGGAGAC GCCGGGTGAC TGA
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Protein sequence | MTQFAKNALA ALCVLSVLVL APMARAQDQV VNFNQAEIQA VIDDVSAVTG YTFIVDPNVR GRVTITSQAP LTSDQYFQVF LSTMRVHGYT VVPTASGAYQ IVPDQAGARS ANPVNSNLRG DQYVTAVVRL NHVASRDALA VVRPLIGAQG SVNATETGNV LVMVDYAENI ARLRQVIRDL DRDTSVVEMV ELTNVSAGDM TRILQQMRTS STAGEDETIF NVAIAPIPAS NTVLLRGNRD AVDRMIALVR RVDSVSQSNR SFRVIYLSHA DGEHLLPILQ QVVDTLVAGE GTTRAPSVSH HAPTNALVIN ADPDVQRQLE LVIRQLDIRR PQVLVEGIIV EMSDSTAREL GVQMLLAGGE GDTPLAMTRF SSNNPDLLAL TGAATSPGDD DSDLNVSLRD AAINSLLGAS GGTLGFGGQN GSGNLFGLVL NAVESDVNSN VLATPSIMAL DNEEAYFLSG QEIPVTTGEA LGSNNTNPFR TVDREEVGVK LTVLPQITEG NTVRLHIVQE VSSVAGAVNA GSSDLITNKR EISTTVLADN GEIIVLGGLI QQEDEISEDG VPGLRRLPGV GRLFRSEGST TRRTNLMVFI RPTIIRSEAD MQALTDNRYD FIRNEQIAGS PNGTSSLESI VEMMLVEMDA PVATAETPGD
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