| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_0345 |
|---|
| Symbol | |
|---|
| ID | 4285497 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | - |
|---|
| Start bp | 409757 |
|---|
| End bp | 411394 |
|---|
| Gene Length | 1638 bp |
|---|
| Protein Length | 545 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638139808 |
|---|
| Product | nitrite/sulfite reductase hemoprotein beta subunit |
|---|
| Protein accession | YP_755576 |
|---|
| Protein GI | 114568896 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0155] Sulfite reductase, beta subunit (hemoprotein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.135047 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACAAGT ATGACAGCTA TGACCACGCC ATGGTGGCCG ACCGGATCGC GGAGTTTCGC
GACCAGGTGA CGCGCCGCCT CGATGGTCGT CTGACCGAGG ACCAGTTCAA GCCGCTGCGC
CTGATGAATG GCGTCTATCT GCAGCTGCAC GCCTACATGC TGCGGGTTGC CATCCCCTAC
GGGACTTTCA ACAGCACCCA GATGCGGACC CTGGCCGGTA TCGCGCGCGA CTATGACCGC
GGCTATGGCC ACTTCACGAC GCGCCAGAAC CTGCAATACA ACTGGCCGGC CCTGGTCGAC
ATTCCCGACA TTCTCGACCG CCTCGCCGCC GTCGAAATGC ACGCCATCCA GACCTCGGGC
AATTGCATCC GCAATGTCAC CGCCGACCCG TTTGCGGGCG CAGCGGCGGA CGAGCTGGAA
GATGGTCGCC CCTGGGCCGA GATCGTCCGG CAATGGTCGA GCTTCCACCC GGAATTCACC
TTCCTGCCGC GCAAGTTCAA GATCGCCGTC AACGGGGCGA AAGCCGACCG TGCCGGGATC
CGCGTGCATG ATATCGGCCT GCAGATCGTC CGGAACGAGG CCGGCAAGAC CGGGTTTGAG
GTCTGGGTCG GAGGCGGCCA GGGCCGCACG CCGCGCCTGG GCCAGCTGAT CAATCCCTTC
CTGGCGCCGG AGGACCTGTT GTCCTACCTG ACCGCCTGCC TGCGCGTGTA TAATCAGCAC
GGCCGCCGCG ACAATCTCTA CAAGGCCCGG ATCAAGATCC TGGTCGAGGC GCTGGGCGCC
GAGGAATACG GCCGTCAGGT CGAGGATGAA TGGGCCGTGA TCCGGGATGG TGAGCTGAAA
CTCCCGGCCG AGGAAATCGC CCGCATCCGC GCCTTTTTCG GCAAGCCGAA ACAGGCCGAT
CCCGCGCCGG TACCGGTGAC GGAAAACCGC GCCTTCGCCC GCTGGCTCGA TCGCAATCGC
CGTGACCATG CGGTGAACGG CCTGTCTTCG CTGGTGATCT CCCTGAAACC CATCGGCGGC
ACGCCGGGCG ATATCACCGA CGCCCAGATG GACGCCGTCG CCGACCTCGC CGAGCGCTAT
GGCTTCGACG AGATCCGCGC CACGCCGGAC CAGAACCTGA TCCTGCCGCA TGTCCGCAAT
GATGATCTGG AAGCGGTGTG GAACGGGCTG GTCGAGGCCG GTCTCGCCGT CGCCAATGCC
GGCCTTGCCA CCGATATCGT CGCCTGCCCG GGTCTGGATT ATTGCAACCT GGCCAATGCC
CGCTCGATCC CGATCGCCCA GGCGATTTCC AGCCTGCTGG AAGAAAAGGG CCTGTCGGAG
AAAGCCGGTG ATGTGACCAT CAAGATCGAT GGCTGCATCA ATGCCTGCGG ACACCACCAT
GTCGCCCATA TCGGCGTGCT CGGCGTCGAC AAGCGCGGCG AGGAATTCTA CCAGATCACG
CTGGGCGGGG CCTTCGGGGC CGATGCTGCC ATCGGCTCGA TCATCGGCAA GGGCCTCGCT
GGCGAGGACG TGCCCGCCGC CATTGCCCGC CTGCTGGAAA CCTATCTCGA CATCCGCGCC
TCAGACGAGC GCTTCATCGA CACGCTGCGC CGTGTCGGAT CCGACGCCTT CAAGGAGGCC
ATTTATGCTG ACGCTTGA
|
|---|
| Protein sequence | MYKYDSYDHA MVADRIAEFR DQVTRRLDGR LTEDQFKPLR LMNGVYLQLH AYMLRVAIPY
GTFNSTQMRT LAGIARDYDR GYGHFTTRQN LQYNWPALVD IPDILDRLAA VEMHAIQTSG
NCIRNVTADP FAGAAADELE DGRPWAEIVR QWSSFHPEFT FLPRKFKIAV NGAKADRAGI
RVHDIGLQIV RNEAGKTGFE VWVGGGQGRT PRLGQLINPF LAPEDLLSYL TACLRVYNQH
GRRDNLYKAR IKILVEALGA EEYGRQVEDE WAVIRDGELK LPAEEIARIR AFFGKPKQAD
PAPVPVTENR AFARWLDRNR RDHAVNGLSS LVISLKPIGG TPGDITDAQM DAVADLAERY
GFDEIRATPD QNLILPHVRN DDLEAVWNGL VEAGLAVANA GLATDIVACP GLDYCNLANA
RSIPIAQAIS SLLEEKGLSE KAGDVTIKID GCINACGHHH VAHIGVLGVD KRGEEFYQIT
LGGAFGADAA IGSIIGKGLA GEDVPAAIAR LLETYLDIRA SDERFIDTLR RVGSDAFKEA
IYADA
|
|---|
| |