Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmar10_0219 |
Symbol | |
ID | 4283892 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Maricaulis maris MCS10 |
Kingdom | Bacteria |
Replicon accession | NC_008347 |
Strand | + |
Start bp | 231179 |
End bp | 231874 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 638139684 |
Product | integrase catalytic subunit |
Protein accession | YP_755452 |
Protein GI | 114568772 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3316] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.465023 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTAACC CGTTCAAATA TTTCAAAACC TCGCCAGAGA TTATCCGCCT TGCGGTGATG ATGTACATCC GCTTTCCGCT CTCGCTTCGA AACGTGGAAG ATCTGCTTCA CGAACGGGGC ATCGATATCA CCCACGAAAC CGTGCGTTTT TGGTGGAACC GGTTCGGCCC GCTGTTCGCC AGTTCGATCC GCAAACGCCG CGTGGCGAAT GGCTCTTACT CGAACTGGGC CTGGCACCTC GACGAGGTTT TCGTGAAGAT CAATGGTGAG CTTCATTATC TCTGGCGGGC TGTTGATCAC GAAGGTGAAG TGCTCGAAGC GTATGTGACG AAGCGCCGTG ATCGCAAGGC AGCGTTGAGA TTTCTGCGCA AGGCGATTAA GCGATACGGC CGTCCCGAGG CGATCGTTAC CGACAAGTTG CAGTCCTATA AATCCGCGTT TCGCGAGCTT GGAATGAGCC GTCGCCAAGA GACGGGGAGG TGGCTCAATA ACCGAGCCGA AAACTCGCAT GTACCCTTCC GGCGCCGCGA GCGGGTGATG GGCAAATTTC GAAGTTTCGA GACTCTGCAG AAATTCGTTT CAACCCACTC TTCGGTCCAC AATCATTTCA GCCACGAACG CCATTTGAGC CGTCGAGAAA TCTTCAAGGA AAACCGTTCT GCCGCCCTGG CCGAATGGCG TCAACTCGCG GCTTGA
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Protein sequence | MRNPFKYFKT SPEIIRLAVM MYIRFPLSLR NVEDLLHERG IDITHETVRF WWNRFGPLFA SSIRKRRVAN GSYSNWAWHL DEVFVKINGE LHYLWRAVDH EGEVLEAYVT KRRDRKAALR FLRKAIKRYG RPEAIVTDKL QSYKSAFREL GMSRRQETGR WLNNRAENSH VPFRRRERVM GKFRSFETLQ KFVSTHSSVH NHFSHERHLS RREIFKENRS AALAEWRQLA A
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