Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mlut_06490 |
Symbol | |
ID | 7986539 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Micrococcus luteus NCTC 2665 |
Kingdom | Bacteria |
Replicon accession | NC_012803 |
Strand | + |
Start bp | 707173 |
End bp | 709077 |
Gene Length | 1905 bp |
Protein Length | 634 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644805619 |
Product | type IV secretory pathway, VirD4 component |
Protein accession | YP_002956737 |
Protein GI | 239917179 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.00928914 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGACGCG AACGTGGCAA CAACTCGGTC CTGGAAGGGG ACAACCCGGC CGAGACGGCA CTGATCTGGC TCATGGGGCC GGCGGTGCTG CTCTACGGGG CGTACCTGCT GGCCGGGTTC CTGGCCGGGC GTATCCACTG TGGAGCGCCG ACGAAGCCGG ACTCGCTGTT CGCGCCGCTG GGCTTCCTCG TGGGCGAGCA CGACCCGGCC GCGTTCGGGG CCACCGCGCA GGGATGCATG GCGACCACCG GCGGGGTCAT CGGCTGGCTG ATCGGTCTGG GGGTGCTGGC CCTCGTGCTG ATCGGCGTGG CGGTGACGGC GTGGAGCCGG TACCAGCAGT CGGACAAGAA GTTCATCAAG GAGCTGCGCG AGCGCGAGGG CCTGGCCCGG TCTGCGGAGA TCACCAAGAC GGTGGGCCGC AAGTCGGTGC TGTCCCGGGT GAAGAAGGTG CGGCCCTCGA TCAAGAAGCC GGCCATCACG GACGGGGCCA TGCGTCTGGG CAAGGCCGAG GGCGTGGACG TGTTCGCGTC CTACGAGGAG TCGGTGGTGC TGATCGGCCC GCCGCGCTCG GGCAAGGGCG TGCACCTGCT GATCGGTGCG ATTCTCGACG CACCCGGCCC GGTCATCACG ACCAGCTCTC GCGCGGACAA CCTGGGGGCC ACGGCCGAGC TGCGCAAGGC CAAGGGGCCG GTGGCCCTGT TCGACCCGCA GGGGCTGACC GGTCAGCCCT CCACGCTGAA GTGGTCCCCG ATCACGGGCT GTGAGGAGCC GCGCGTGGCG AATCAGCGGG CGGCGTCGCT AATCGGTGCC TCCGGCCTGG GGTCCTCCAG CTCGAACGCG GAGTGGCAGG CCCCGGCGAT CACGATCATG GAGTGCCTGC TGCACGCCGC GGCGCTGGGT GAGCGCACCG TGGATGATCT GATGCGGTGG GGCAACAACC CGGCCGAGGC CAAGGAGGCC GTGAAGATCC TCACCGAGCA CCCCAAGGCA GCGCTGAACT GGAACCTGGT GCTCAAGGGC ATCATCGAGG GCGACCCGAA GCTGCTCCAG TCCAAGTGGT TCGGCGTGGA GGGCGCGGTC AAGGGCCTGT CGGTGCCCGA GGTCCGCGAC GTGCTGCGAC CCAACCGGTT CGAGGAGACC CTGGACATCG ACAAGTTCCT CACCGAGTGC GGGACGCTCT ACATCGTGGG CACCAAGACC GGTGGCTCGT CGGCGGGGCC GTTCCTGATC GCGATGATGG ACGCCCTCAC CGAGCGTGCC CGTGAGCTGG CGGCGAAGTC GCCCGGGAAC CGGCTGGACC CGCCGCTGTC CCTGGTGCTC GATGAGATCG CGAACATCTC CGGTGCCTGG CCGGGCCTGA CCCAGCTCAT GGCGGACGGC GGCGGCGTGG GCATCTCTCC GTTCGCGGTG TTCCAGTCGA TGGCCCAGGC CCGCAACGAG TGGGGCGAGC AGCAGGCCCA GGCGCTGTTC GACGCGGCCA CGGTGAAGGT CCAGCTCGGG GGTGCCTCGA ACGTGTCCGA CCTGGAGCAG TTCGCCAAGC TGGCCGGTCA GCGCAAGATC ATGCGGACCT CGAAGTCTCG CGGCAAGGAC AACACCTCGG TCTCCGAGCA GATCCACGAC ACCGAAGTGG TCTCGGTCGC GGAGCTGCGT CGGCTGCCGT TCGGGTGGGG GATCCTGCTG AATCGCAACG GCCGGCCGAT CCTGATGCAG ATGACCCGCT GGTGGGACCG CAAGGACGGC AAGCAGATCA AGGAGGCCGC GGGGCGGTAC TCGAAGGCGC TGCTGGCCGA GCTGGAGTCC AAGGACCCGG CTCCCTCGAC ACCGACCGAC GCGGACCGGG CCGAGGACTC CGTGGCGGCG TTGGACCCGG TGCCGGAGAC GGCCCCGGCG ATCCCGGTGC GGTGA
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Protein sequence | MRRERGNNSV LEGDNPAETA LIWLMGPAVL LYGAYLLAGF LAGRIHCGAP TKPDSLFAPL GFLVGEHDPA AFGATAQGCM ATTGGVIGWL IGLGVLALVL IGVAVTAWSR YQQSDKKFIK ELREREGLAR SAEITKTVGR KSVLSRVKKV RPSIKKPAIT DGAMRLGKAE GVDVFASYEE SVVLIGPPRS GKGVHLLIGA ILDAPGPVIT TSSRADNLGA TAELRKAKGP VALFDPQGLT GQPSTLKWSP ITGCEEPRVA NQRAASLIGA SGLGSSSSNA EWQAPAITIM ECLLHAAALG ERTVDDLMRW GNNPAEAKEA VKILTEHPKA ALNWNLVLKG IIEGDPKLLQ SKWFGVEGAV KGLSVPEVRD VLRPNRFEET LDIDKFLTEC GTLYIVGTKT GGSSAGPFLI AMMDALTERA RELAAKSPGN RLDPPLSLVL DEIANISGAW PGLTQLMADG GGVGISPFAV FQSMAQARNE WGEQQAQALF DAATVKVQLG GASNVSDLEQ FAKLAGQRKI MRTSKSRGKD NTSVSEQIHD TEVVSVAELR RLPFGWGILL NRNGRPILMQ MTRWWDRKDG KQIKEAAGRY SKALLAELES KDPAPSTPTD ADRAEDSVAA LDPVPETAPA IPVR
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