Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mlg_2825 |
Symbol | |
ID | 4270752 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alkalilimnicola ehrlichii MLHE-1 |
Kingdom | Bacteria |
Replicon accession | NC_008340 |
Strand | - |
Start bp | 3209612 |
End bp | 3210424 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 638127587 |
Product | shikimate dehydrogenase |
Protein accession | YP_743655 |
Protein GI | 114321972 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0169] Shikimate 5-dehydrogenase |
TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGACC GTTATGCCGT GATGGGCAAC CCCATCGAGC ACAGCAAGTC GCCCGAGATC CACCGGATGT TCGCCGAGCA GACCGGCCAG GCCATCGCCT ACGAGCGGAT GCGGGTGCCG CTGGAGGGCT TCGAGCCGGC GGTGCGCGCC TTCTTCGCCA GCGGCGGGAA GGGGCTGAAC ATCACCGTCC CCTTCAAGGA GCAGGCTTGG GTCCTGGTCG ACCGGCGCGC GCCCCGTGCC GAGCGGGCCG GGGCAGTGAA CACCCTGCTG GCGGAGGCCG GCCGGCTGGT GGGGGACAAC ACCGACGGCA CCGGTCTGGT GCGGGATCTG ACCGTGAACC ACGGTGCCGC GCTGCAGGGA CGGCGGGTGC TGGTCATTGG CGCGGGCGGT GCGGTGCGCG GGGTGCTGCC GGCCCTGCTG CCCGAGGCGC CCGGTGAGGT GGTGATCGCC AACCGCACGG TGGCGCGGGC GGAGGCCCTG GTGGAGCTCT TCGCCGACCA GGGCCGGTTG TCCGCGGTGG GGTTCGACCG CCTGCAAGGG CCTTTCGACG TGGTGATCAA CGGCACCTCC GCCGGGCTGG CCGGTGAGCT GCCGCCGCTG CCCGACGATC TGCTGGCGCC GGGCGCCACC TGCTACGACA TGGTCTACGG GGATCAGCCC ACCCCCTTCG TGCGCTGGGC CCGGGCGCAC GGCGCCGCAA TGGCGGTGGA TGGCCTGGGC ATGCTGGTCG AGCAGGCTGC GGAGTCCTTT CTGATCTGGC GCGGGGTGCG TCCGGAGAGC GCACCGGTGA TTGCGGCGTT GCGGCCCGAG TGA
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Protein sequence | MTDRYAVMGN PIEHSKSPEI HRMFAEQTGQ AIAYERMRVP LEGFEPAVRA FFASGGKGLN ITVPFKEQAW VLVDRRAPRA ERAGAVNTLL AEAGRLVGDN TDGTGLVRDL TVNHGAALQG RRVLVIGAGG AVRGVLPALL PEAPGEVVIA NRTVARAEAL VELFADQGRL SAVGFDRLQG PFDVVINGTS AGLAGELPPL PDDLLAPGAT CYDMVYGDQP TPFVRWARAH GAAMAVDGLG MLVEQAAESF LIWRGVRPES APVIAALRPE
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