| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_2736 |
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| Symbol | |
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| ID | 4270990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | + |
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| Start bp | 3103832 |
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| End bp | 3105820 |
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| Gene Length | 1989 bp |
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| Protein Length | 662 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638127498 |
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| Product | Fis family GAF modulated sigma54 specific transcriptional regulator |
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| Protein accession | YP_743566 |
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| Protein GI | 114321883 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.419098 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATCGA TTATCGCCCC GATCTCCTTG GGACGCGCCT CTGAGGGCGG ATACCCCAGC
CCCCTCCCGG GCGACAAGGC GCAGCGCCTC ATTTCCAAGA GTTGGCAGCG TTGTCAGGCC
TACGGCCTCG ACCCCCGCAA AAAGCCAAAG GACGCCAACG TGCTGGAAGG CCCGCAGGTA
AAGGAAGAGC GGGAGCGTCA CGGCGAGCTG CTGAAAGTGG CCAACGCCGA GATGCACAGC
CTTTACCAGC AGGTCTCCGG GTCCGGCTGG TCCCTGCTGC TCACGGACAA CCGCGGCGTG
ATCCTCGACT ACGTGGGAGA CCCGAACCTG CGGCGTGAAT TCCGTTCGGC GGGCCTGTGG
CTGGGTGCCG ACTGGAGTGA ACGCCACGAA GGTACCAACG GCATCGGCAC CGCCCTCACT
GAGAGCCGCC CGGTGGCAGT ACTGCGGGAC CAGCACTATA AGGCGTGTCA CCACGCGCTG
AGCTGTTGCG GGGCCCCCAT TCTGGACGCC AACGGCCAGG TGATGGCCGT CCTGGACGCC
TCCACCGTGA ACGGCAATCA GACGCCGGAG ACCCAGAGCC ACACCCTGGC ACTGGTCACC
CTGTCCGCCC AGTTCATCTC CAAGTGGCGG TTCCTGGAGG AATTCTCGGA TGCCATCATC
ATCCGCTTCC ACAGCCGCTG CGAATATGTC GGTCTGATCA ATGACGGTGT GCTGGCGGTC
TCCCGGGACG GCACCATCGT TGGTGCCGAC CACAACGCCT GCGTCTTCCT GGGACTCCCC
GACCGGCATC GCCTCATCGG CTGGCCCATT GACCAGGTCT TGGACATCCG TCCGGAGATC
CTGGTGGAAC GGGCCGAACG CCCGTACCTC CCCTACTGGG TGCTCACCAC GGCCCAGGGC
ACCCAGTTGC ACGCCCGTAT CCAGCTGGGG CACACAGCAG CGGGCCGCCG GGCGGCGGAA
CAGCCCGCCC GCCCCGTACC GGTCCAAAGC CGCAGTGCCA GTCAACCCCG CGATCACCGC
GCCACGCTCT GCACCCTGGA GGCACTCAAG GGCAATGACC CGCGCATGGC GCGCAACGTT
AACCGGGCCT ACCGGATCAT CGATAAGGAC ATCCCCATCC TGTTGAACGG CGAGACCGGC
ACCGGCAAGG AACTGTTCGC CCGCGCCGTG CATACGGCCA GCAGCCGCAG GGACGGCCCC
TTCGTTGCCG TGAACTGCGC CTCGATACCG GAGCCCCTGA TCGAGAGCGA GCTGTTCGGC
TACAAGGGTG GCGCCTTTAC CGGCGCCGAC CGCAACGGGC GCAAGGGCAA AATCCTCCAG
GCCCACGGCG GCACGCTGTT CCTGGACGAG ATCGGGGATA TGCCGCTGGA ACTGCAGGCC
CGCCTGCTGC GGGTCCTGGA AGAGCGCGAG ATCGTGCCCA TCGGCGGTGA CAAACCACAG
GCGGTGGATG TCTACCTGGT CTCGGCGACT CATCACAACC TTCCGGAGCT GGTGGCCGAG
GGGCGCTTTC GGGAAGACCT TTACTACCGA CTCAACGGCC TCACCCTGAC CCTACCCCCG
TTGCGCGACC GGGCTGACTG CCAGGATGTC ATTCGCTGCA TCCTGCGACT GGAGAGCGAT
GGCCGGGTGG ATATCGATCA GGCGGCGTTG GCGGTGCTGC GCAACCATCC CTGGCCCGGC
AATATCCGCC AGCTACGCAA CGTGCTGCGC ACCGCCGTTG CGCTCAGCGA TGGCGAGACG
CTCACGGTGG AAGACCTGCC CGACGATGTG CTGGATGCCG CTGAGACAGC CGGCGACGAC
CAGGTGATAG AGGGCACCTG CACCGGCGGC GGCGACCCGT TGGCCAACGC CGAGCGCCGG
GCACTCCAAG CCGCCCTGGA GCAGCACGGC GGCAACGTCA GCCGCACTGC GGAGAGCCTG
GGCGTGAGCC GTAACACCCT CTACCGGAAG ATGCGGCGGC ACGGTCTCGG CGGCGCCCGC
GGCGGCTGA
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| Protein sequence | MSSIIAPISL GRASEGGYPS PLPGDKAQRL ISKSWQRCQA YGLDPRKKPK DANVLEGPQV
KEERERHGEL LKVANAEMHS LYQQVSGSGW SLLLTDNRGV ILDYVGDPNL RREFRSAGLW
LGADWSERHE GTNGIGTALT ESRPVAVLRD QHYKACHHAL SCCGAPILDA NGQVMAVLDA
STVNGNQTPE TQSHTLALVT LSAQFISKWR FLEEFSDAII IRFHSRCEYV GLINDGVLAV
SRDGTIVGAD HNACVFLGLP DRHRLIGWPI DQVLDIRPEI LVERAERPYL PYWVLTTAQG
TQLHARIQLG HTAAGRRAAE QPARPVPVQS RSASQPRDHR ATLCTLEALK GNDPRMARNV
NRAYRIIDKD IPILLNGETG TGKELFARAV HTASSRRDGP FVAVNCASIP EPLIESELFG
YKGGAFTGAD RNGRKGKILQ AHGGTLFLDE IGDMPLELQA RLLRVLEERE IVPIGGDKPQ
AVDVYLVSAT HHNLPELVAE GRFREDLYYR LNGLTLTLPP LRDRADCQDV IRCILRLESD
GRVDIDQAAL AVLRNHPWPG NIRQLRNVLR TAVALSDGET LTVEDLPDDV LDAAETAGDD
QVIEGTCTGG GDPLANAERR ALQAALEQHG GNVSRTAESL GVSRNTLYRK MRRHGLGGAR
GG
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