| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_2675 |
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| Symbol | |
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| ID | 4268808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | + |
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| Start bp | 3028006 |
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| End bp | 3030528 |
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| Gene Length | 2523 bp |
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| Protein Length | 840 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638127434 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_743505 |
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| Protein GI | 114321822 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains
[COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0500157 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 7.41843e-16 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCCACC AGCTACCCGT AGAGCGCATC GTCCAGTCGA GCATACTCCA CTGTGGCCCC
GAGACCCCGC TCTGCCAGGC CGCGGAACGC ATGGCCGAGC GTCAGTGCAG CTCCATTCTG
GTGATGGAGG CGGACCGCGC GGTGGGCATC TGGACCGAAC GGGACGCCCT GGCGGTGGAT
TTCTCCGACC CCTCCGCCAT TCGCAGACCC ATCCGCGAGG CCATGAGCAG CCCGGTTGCC
TGTATCCCCG GGGAGACGGA GCTTGGGGAG GTGGCGATGC GCTTTCGCGC CGAACGGTGC
CGCCACTTCC TGGTGATCGA CCGGGGCGGC CAGCCCCTCG GGCTTGTCTC GCAAACGGAT
GTGGCCCTGA ACCAGGGCAT GGAACCCTAC CTGAGACTGC GCGAGGTGGG CGCCGCGATG
CGCACTGCGC CTCTGGTGTT GGCCGCCGAC ACACGATTGT CGCAGGCGGC GCGGCGCATG
CGCGAATCAG AGCGGGATGC GGCCGTGATC CGCTTTGCTG ACACCGACGA CCTGGGCATT
GTCACCGAGC GGGACCTGGT CCGCTGCATC GCCCGCTACC CCGGGGACAC GCCCATCGGT
CATCTGGCCA GCCGGCCACT GCTCACCGTG GCGGCGAACG ATATGCTCAT CCGCGCCCGT
GACATGCTGA TGGACCACCA GGTCCGGCAC CTCGCCGTTC TCGACGACCG GGGCCAGGTG
GTGGGTCTGC TCGGCTTCCA GGACCTGCTG GCCGGTGCCG AGCAGAGCTA TCTGAAGGAT
CTGCGTCGCG CACTGGAGCA GCGCGACAAA GCATTGGCCC AGTCGCGCAA GCACCTGCAA
CTGGCCGAGC GGGTCATCGA CTCCTCACTG GAGGGGATCG TCATCACCGA CGCCCACGCC
CGGATCGAGT TCGTGAACCC GGCCTTCACC CACCTGACCG GTTACAGCCT GGAAGAGGTG
GCCGGCCGCA CACCGGCAGT GCTCTCCTCC GGCCGACACC CGCCTTCGTT CTACCGGGAG
ATGTGGCAGG CCCTGCAGGA GCAGGGCTAC TGGCGCGGCG AGATCTGGAA CCGGCGCAAA
TCCGGGGCCC TCTACCTGGA ACTGCTCACC ATCACCGCTA TCACCAATGA CGATGGTGAC
ACCACCCATT ACGCCGGGCT GTTCACCGAC ATCACCCACA TCCGGGAGAA CGAGCGGCAG
ATCCGCCAAC TGGCCTACTA CGACCCCCTC ACCCGGCTGC CCAACCGCCG GCTTCTGGAC
GACCGGCTGT CACTGGCGAT CAAGCATGCC CACCGCCACC GACAGCGCCT GGCGGTAATG
TTCATCGATC TGGACCACTT CAAACAGGTG AATGACACCC TGGGCCACGC CGTTGGCGAC
GAGCTGCTGC TGAGGGTCTC GGAGCGGCTG CGCGAGCACC TGCGCGAGGA CGACACCCTC
GCCCGCCTGG GTGGAGACGA ATTCCTTGCC CTGCTGCCGG ACCTGCAGGA AGTGGATGAG
GCCATCCGCG TCACCCAACG CCTGATTGAG GCAATCAGTC AGCCCTACAC CATCGGCGAC
CACGACTTCC GGGTGGGTTG CAGCATTGGG TTAAGCCTCT ATCCGGACGA CGGGGAGAGC
CCGGATGCGC TGATCCGTAA CGCCGACGGG GCCATGTACC GCTCCAAGAC AGAGGGTCGC
AACACCTACC GGCTCTATGC GCCGGAGATG GACACCCGCG CCAAGAACCA GTTGGCGCTG
GAGACGGCGT TACGCGACAC CGCCGAGACC GGCGAGGGCC TTTCGATCCA TTATCAACCG
ATTTTCGACT GGCGGACTGG CGCCCTGCAT TCCGCCGAGG CGCTGCTGCG CTGGCACCAC
CCGACCCGGG GCGCGGTCGC ACCGGGCGAG TTCATCCCCC TGGCCGAGCG CTCCGGACTG
ATCATCCCGT TGGGCCAGGC GGTGATGCGC ATGGTCTGCA CCCAGCTCAA GCGCTGGCAG
GCGGCCGGCC TACGGCCGGT GCCCGTGGCC ATCAACCTCT CTGCCAAGCA GTTCTGGCAG
GACGAACTGC CCGGCTTCAT CCGGAAGATG CTGCAGCGTT GCGATTTAAA CCCGGGGCTG
ATGGGTTTTG AGCTGACCGA GAGCACGCTA ATGCACGATA TCGAGCGTGG GCTCGACACC
CTGGCGGCAT TACGGGGGAT GGGCTGCAGC GTGGCCATCG ACGACTTTGG TACCGGCTAT
TCCTCGCTGA CCTACCTGCA GCGGTTGCCG GTGACCACCC TGAAGATCGA CCGTAGCTTC
GTTAGCGACC TGGGCACGTG CCGGAAGGGA GGCTGTGCCA TCGTGGCGGC GGTCACCGGG
CTGGCACGCG AACTGGAATT GCAGGTGGTG GCCGAGGGTG TGGAGACCGA GGCCCAGCTC
CGCGCCCTGG ACCGCTACCA GGTGGCATTG GTTCAAGGGT TCAAGACCGG CCGCCCGGTC
CCAGCCGATG CCTTCAGCGA GGCCTACCTG CGAGCGATGA CAAGCGGCCG GGACGGGGAT
TGA
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| Protein sequence | MSHQLPVERI VQSSILHCGP ETPLCQAAER MAERQCSSIL VMEADRAVGI WTERDALAVD
FSDPSAIRRP IREAMSSPVA CIPGETELGE VAMRFRAERC RHFLVIDRGG QPLGLVSQTD
VALNQGMEPY LRLREVGAAM RTAPLVLAAD TRLSQAARRM RESERDAAVI RFADTDDLGI
VTERDLVRCI ARYPGDTPIG HLASRPLLTV AANDMLIRAR DMLMDHQVRH LAVLDDRGQV
VGLLGFQDLL AGAEQSYLKD LRRALEQRDK ALAQSRKHLQ LAERVIDSSL EGIVITDAHA
RIEFVNPAFT HLTGYSLEEV AGRTPAVLSS GRHPPSFYRE MWQALQEQGY WRGEIWNRRK
SGALYLELLT ITAITNDDGD TTHYAGLFTD ITHIRENERQ IRQLAYYDPL TRLPNRRLLD
DRLSLAIKHA HRHRQRLAVM FIDLDHFKQV NDTLGHAVGD ELLLRVSERL REHLREDDTL
ARLGGDEFLA LLPDLQEVDE AIRVTQRLIE AISQPYTIGD HDFRVGCSIG LSLYPDDGES
PDALIRNADG AMYRSKTEGR NTYRLYAPEM DTRAKNQLAL ETALRDTAET GEGLSIHYQP
IFDWRTGALH SAEALLRWHH PTRGAVAPGE FIPLAERSGL IIPLGQAVMR MVCTQLKRWQ
AAGLRPVPVA INLSAKQFWQ DELPGFIRKM LQRCDLNPGL MGFELTESTL MHDIERGLDT
LAALRGMGCS VAIDDFGTGY SSLTYLQRLP VTTLKIDRSF VSDLGTCRKG GCAIVAAVTG
LARELELQVV AEGVETEAQL RALDRYQVAL VQGFKTGRPV PADAFSEAYL RAMTSGRDGD
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