| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_2634 |
|---|
| Symbol | |
|---|
| ID | 4270679 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | + |
|---|
| Start bp | 2984946 |
|---|
| End bp | 2985860 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638127393 |
|---|
| Product | coproporphyrinogen III oxidase |
|---|
| Protein accession | YP_743464 |
|---|
| Protein GI | 114321781 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0408] Coproporphyrinogen III oxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0385786 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTAG ACACCCCAGC CGTCCTCGAC TACCTCAAGG AGCTCCAGGA CCGCATCTGC
CACGAGCTGG CAGAGCTGGA CGGGGGCCCC GGCTTCGAGG AGGAGACCTG GGAGCGGGAG
GAAGGGGGCG GGGGTCGCAG CCGGGTGCTC AAGCACGGAA ACCTCTTCGA GCAGGCCGGG
GTCAACTTCT CCCACGTCTT CGGCAAGCGC CTGCCCGACA GCGCCACGGC CCGGCGCCCA
GAACTGGCGG GCCGCGGCTT CCAGGCCATG GGGGTCTCCC TGGTCCTGCA TCCGGAGAAC
CCCCACGTCC CCACCACCCA CGCCAACGTC CGCTACTTTG TGGCGGACAA GGCCGGCAGC
GAACCGGTCT GGTGGTTCGG GGGCGGCTTC GACCTCACGC CCTATTACGG CTACCAGGAG
GACGCCGTCC ACTGGCACCG CACCGCCCGC GCCGCCTGCG AGCCCTTCGG TGCCGAGGTC
TACCCCCGCT ACAAACAGTG GTGCGACGAG TACTTCTACC TGCCCCACCG CGGCGAGACC
CGGGGCATTG GCGGGCTGTT CTTCGATGAC CTGGACGACT GGGGCTTTGA GCGCAGCTTC
GCCTTCATGC GCAGCGTCGG CGACCACTTC CTGCCCGCCT ACCGCCCCAT CGCCGAGCGC
CGCCGCCACC AGCCCTGGGG CGAGCGCGAA CGCGCCTTTC AGCTCTACCG CCGGGGCCGC
TACGCCGAGT TCAACCTACT CTACGACCGC GGCACCCGGT TCGGCCTGCA ATCCGGCGGG
CGCACCGAGT CGATTCTCAT GTCGATGCCA CCCATGGCCC GCTGGGAGTA CAATTGGCAC
CCGGAGCCCG GCAGCCCGGA GGCGCAGCTC TATGACCGCT TCCTGGGCGC ACGCAACTGG
CTGGACGGAG ACTGA
|
|---|
| Protein sequence | MSVDTPAVLD YLKELQDRIC HELAELDGGP GFEEETWERE EGGGGRSRVL KHGNLFEQAG
VNFSHVFGKR LPDSATARRP ELAGRGFQAM GVSLVLHPEN PHVPTTHANV RYFVADKAGS
EPVWWFGGGF DLTPYYGYQE DAVHWHRTAR AACEPFGAEV YPRYKQWCDE YFYLPHRGET
RGIGGLFFDD LDDWGFERSF AFMRSVGDHF LPAYRPIAER RRHQPWGERE RAFQLYRRGR
YAEFNLLYDR GTRFGLQSGG RTESILMSMP PMARWEYNWH PEPGSPEAQL YDRFLGARNW
LDGD
|
|---|
| |