| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_2605 |
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| Symbol | prpB |
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| ID | 4269238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | - |
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| Start bp | 2954067 |
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| End bp | 2954948 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638127364 |
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| Product | 2-methylisocitrate lyase |
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| Protein accession | YP_743435 |
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| Protein GI | 114321752 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2513] PEP phosphonomutase and related enzymes |
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| TIGRFAM ID | [TIGR02317] methylisocitrate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.221019 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.000512853 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCATGA CAACCCCCGG CGCGCGCTTC CGCGCCGCCC TGGAGGCCAA CCGGCCGTTG
CCGATCGTCG GCACCATCAA CGCCTATACC GCTATGATGG CGGAGCGGGT GGGGCACCAG
GCGATCTACC TCTCCGGTGG CGGGGTGGCC AATGCCTCCT ACGGCCTGCC GGATCTGGGG
ATCACCACCA TGAACGATGT GGTGGAGGAC GCCCACCGTA TCTGCGGGGC CACGGACCTG
CCGCTGCTGG TCGATATCGA CACCGGTTGG GGTGGGGCCT TCAATATCGA GCGCACGGTC
AAGGAGATGC AGCGGGCCGG GGTGGCTGCT GTGCACCTGG AGGATCAGGT GGCGCAGAAG
CGCTGCGGGC ACCGGCCAAA CAAGGCCATC GTCTCCCAGC AGGAGATGGT GGACCGGATC
AAGGCGGCCG CCGACGCCCG TATCGACCCC GACTTTTACC TGATCGCCCG TACCGATGCC
TTTCAGATGG AGGGGCTGGA CGCCGCTATC GAGCGGGCCG CGGCCTGTAT CGAGGCCGGT
GCCGACGCCA TCTTCGCCGA GGCGGTGCAC ACCCTGGACG ACTATCGCGC CTTCTGCGAG
CGGGTGGATG CACCGATCCT GGCGAACATC ACCGAGTTCG GGGCCACCCC GTTGTTCAGT
CAGCAGGAGC TGGCCGAGGT GGGCTGCCGG ATGGTGCTCT ATCCGCTGTC GGCCTTCCGC
GCGATGAATG CCGCGGCCCT GAAGGTCTAT CAGGATATTC ACGAGAAGGG CCACCAGCGG
GATGTGGTGG AGCTGATGCA GACCCGCGAT GAGCTCTACG ACTTCCTGAA CTACCACGAC
TTCGAGCAGA AGTTGGACGC GCTGTTCGAG CAGGACAAAT AA
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| Protein sequence | MSMTTPGARF RAALEANRPL PIVGTINAYT AMMAERVGHQ AIYLSGGGVA NASYGLPDLG
ITTMNDVVED AHRICGATDL PLLVDIDTGW GGAFNIERTV KEMQRAGVAA VHLEDQVAQK
RCGHRPNKAI VSQQEMVDRI KAAADARIDP DFYLIARTDA FQMEGLDAAI ERAAACIEAG
ADAIFAEAVH TLDDYRAFCE RVDAPILANI TEFGATPLFS QQELAEVGCR MVLYPLSAFR
AMNAAALKVY QDIHEKGHQR DVVELMQTRD ELYDFLNYHD FEQKLDALFE QDK
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