Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mlg_2551 |
Symbol | |
ID | 4270939 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alkalilimnicola ehrlichii MLHE-1 |
Kingdom | Bacteria |
Replicon accession | NC_008340 |
Strand | - |
Start bp | 2894078 |
End bp | 2894842 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638127310 |
Product | putative lipoprotein |
Protein accession | YP_743381 |
Protein GI | 114321698 |
COG category | [R] General function prediction only |
COG ID | [COG4105] DNA uptake lipoprotein |
TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00873964 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.0420812 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCGCA AGCCCTGGCT GTGGTCGCTG CTCCTGATCG TGCCGCTGTT GCTGGCCGGC GGCTGTTCCT CCAACGGTCC GGAGCGCCAG GAGGAGCAGG CCACCGCGGA GGAACTCTAT CAGCAGGCGC GGCGCCAGCT GGAGAATGGC AACTACACCA TGGCCGTGGA GACGCTGGAA CGCCTCCAGG GGCGCTTCCC CTTTGGGCCC TTCGCCACCC AGGCGCAGCT GGATATCATC TACGCCTATT ACCAGGCCGG TGAGCTGGAA TCGACCATCG CCGCCGCCGA CCGCTTCATG CGGCTCTATC CCCGCGACCC GAACGTGGCG TACGCCCGGT ACATGCGTGG GCTGGCGAAC GCGGGCGTTG GCGATGAGTT CTTCACCCGG GTTTTCAATC TCGACCGCAG TCTGCGCGAC CCGCAACCGT TGCGTCGCGC CTTTGTGGAT TTCCGGGAGC TGATCCAGCG CCATCCGGAC AGCGAATACG TGGACGACGC CCGAGAGCGG ATGCAGGAGA TCCGCGACCT GCTGGCGCGG CACGAGATCT ACGTGGCGCG CTTCTACCTC CGGCGGGATG CGCCGGTGGC GGCGGTGGGC CGTGCCCGCA CGGTGCTCCA GGAGTACCAG GGCACCGGAG CGGTGGAGGA CGCCCTGGAG GTGCTGGTGG AGGCCTACGG GATGCTAGAG CTGGCGGACC TGCAGCAGGA CGTGCGCCGG GTGATCGGCG AGAACTTCCC CGGCCACCCG TTGGCCGCCC AATGA
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Protein sequence | MSRKPWLWSL LLIVPLLLAG GCSSNGPERQ EEQATAEELY QQARRQLENG NYTMAVETLE RLQGRFPFGP FATQAQLDII YAYYQAGELE STIAAADRFM RLYPRDPNVA YARYMRGLAN AGVGDEFFTR VFNLDRSLRD PQPLRRAFVD FRELIQRHPD SEYVDDARER MQEIRDLLAR HEIYVARFYL RRDAPVAAVG RARTVLQEYQ GTGAVEDALE VLVEAYGMLE LADLQQDVRR VIGENFPGHP LAAQ
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