Gene Mlg_2517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlg_2517 
Symbol 
ID4268772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlkalilimnicola ehrlichii MLHE-1 
KingdomBacteria 
Replicon accessionNC_008340 
Strand
Start bp2861112 
End bp2862965 
Gene Length1854 bp 
Protein Length617 aa 
Translation table11 
GC content69% 
IMG OID638127276 
ProductDNA primase 
Protein accessionYP_743347 
Protein GI114321664 
COG category[L] Replication, recombination and repair 
COG ID[COG0358] DNA primase (bacterial type) 
TIGRFAM ID[TIGR01391] DNA primase, catalytic core 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.986794 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.570872 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGGCA GGATTCCCGA CGAGTTTATC GACGAACTGC TCCACCGCAC GGATATCACC 
GAGGTGGTGG GTGCCCGTGT GCGCCTGAAA AAGACCGGCG CCAACCTGCT CGGTCTCTGT
CCCTTCCACA GCGAAAAGAC CCCTTCCTTC ACCGTGGCCC CGGCCAAGCA GTTCTACCAC
TGTTTCGGCT GTGGCGCGCA CGGCACCGCC ATCCGCTTTC TGATGGACTA CGAGCGGATG
GATTTCCGGG AGGCGGTGGA GTACCTGGCC CGCCAGGCAG GGATGGAGCT GCCGGCCGCC
GCCGCCGCCG CGCCCGTCCC CGACCGCCAC GCCCGGCTCT ACCATGTGCT GGCGGAGGCC
GCCATCTACT ATCAGGAGGC GCTGCGCCGG CACCCGGCCA GCGCGAAGGC GGTGGACTAC
CTGAAGCGGC GTGGGCTGTC CGGCGATATC GCCGCCCGCT TCGCGCTGGG CTTTGCCCCG
CCCGGCTGGG ACAACCTGCT CAAGCGCCAC CGCGACCGCC AGGCCGACCT GGTGGAGGCG
GGGCTGCTCA TCGAGCGTGA CGGCGGCCGC GTCTATGACC GTTTCCGCGA TCGGGTCATG
TTCCCGATCC GAAACCGGCG GGGCACGGTG GTGGGTTTTG GTGGCCGGGT GCTGGGCGAC
GGGGAGCCCA AGTATCTCAA CTCGCCGGAG ACACCCGTCT TTCACAAGGG CCGCGAGCTC
TACGGTTTGT ACGAAGCGGT GCAGGCCCAA CGCAACCCGC CACTGCTGCT GGTGGTGGAG
GGGTACATGG ACGTGGTGGC GCTGGCCCAG CACGGGGTCC AGGGGGCGGT AGCCACCCTG
GGGACCGCGG TCACCCCCGA TCAGGTCAGT CGCTTGTTCC GCGCCACCGA TCGGGTGGTG
TTCTGTTTCG ACGGCGACCG CGCCGGCCGT CAGGCGGCGT GGCGAGCGGT GGAGAACAGC
CTGCCGGCCA TGCGCGAGGG GCGCTCGGTG GAGATCCTGC TGCTCCCCGA GGGCGAGGAC
CCGGACAGTC TGGTGCGTGC CGAGGGTGCG GAGGCCTTCC TCCGGCGGCT GGAGCGGGAG
ACCCGGCCTT TGGCCGAGTA CAGCCTGGAG GAGCTGGCCG ACGGGTTGCG GCTGGATGCG
GTGGACGACC GGGCCCGGCT GGTGCAGAAG GCGGTGCCGT TGGTGCGACG ACTGCCGGTC
GGAATCTACC GGGACTTTTA CGTCGAGAAG CTGGCCGAGC TGGCCCATAC CGGCGTCGGG
CGGATCGAGC AGGCGGTGGA GCAGGGCGGC GAAGGCGCAC GGCCCACGGC GCCGGAGCGC
CCGCCCGCCG CCCGCCGTCC GGCGGGCGGC GGGCGGGGTG CGGCGATGGT GCGCCGGACC
CCGGTGCGCC AGGCCCTCAC CCTGCTGCTG CAACGGCCCG CCCTGGTGGC CCATGCCGGC
CCGCTGGACC AATTGCATGG GGACTTGCCG GGCCTGGATC TGTTGCGGCA GATCCTTGAA
ATCGCCCGGG ATCACCCCGA TGTAAACACT GCGGGGCTGT TGCAGCGCTT TCAGGGGCAT
CCGCAGGAGG CCGCCCTCTG GCGGCTGGCC ACCTGGGAGC TGCCGGGGGG CGATCTCGAG
GGGGAGTTCA CCGACTGCCT CGAGCGCATT CGCCAGGCCT GCAGCAGTCG CCAGACCAGC
GAACTTCGCG CCGAGCTCGA TGAAGAGCGG GATTTTGATG CGGCCAAGGA CAAGCTTCGT
ACGTTGATGC AACGGCGAAG ACTGCAATAC TTGCGGGAGA AAGCCAGCCG TGGCGCCCTC
ACTGATCGGG AGAGCGCGGA ACTGCGGGCC CTGGACGAGG GTCCATCTCA GTAA
 
Protein sequence
MSGRIPDEFI DELLHRTDIT EVVGARVRLK KTGANLLGLC PFHSEKTPSF TVAPAKQFYH 
CFGCGAHGTA IRFLMDYERM DFREAVEYLA RQAGMELPAA AAAAPVPDRH ARLYHVLAEA
AIYYQEALRR HPASAKAVDY LKRRGLSGDI AARFALGFAP PGWDNLLKRH RDRQADLVEA
GLLIERDGGR VYDRFRDRVM FPIRNRRGTV VGFGGRVLGD GEPKYLNSPE TPVFHKGREL
YGLYEAVQAQ RNPPLLLVVE GYMDVVALAQ HGVQGAVATL GTAVTPDQVS RLFRATDRVV
FCFDGDRAGR QAAWRAVENS LPAMREGRSV EILLLPEGED PDSLVRAEGA EAFLRRLERE
TRPLAEYSLE ELADGLRLDA VDDRARLVQK AVPLVRRLPV GIYRDFYVEK LAELAHTGVG
RIEQAVEQGG EGARPTAPER PPAARRPAGG GRGAAMVRRT PVRQALTLLL QRPALVAHAG
PLDQLHGDLP GLDLLRQILE IARDHPDVNT AGLLQRFQGH PQEAALWRLA TWELPGGDLE
GEFTDCLERI RQACSSRQTS ELRAELDEER DFDAAKDKLR TLMQRRRLQY LREKASRGAL
TDRESAELRA LDEGPSQ