| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_2419 |
|---|
| Symbol | |
|---|
| ID | 4269484 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | - |
|---|
| Start bp | 2749926 |
|---|
| End bp | 2750426 |
|---|
| Gene Length | 501 bp |
|---|
| Protein Length | 166 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638127177 |
|---|
| Product | outer membrane lipoprotein Slp |
|---|
| Protein accession | YP_743249 |
|---|
| Protein GI | 114321566 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3065] Starvation-inducible outer membrane lipoprotein |
|---|
| TIGRFAM ID | [TIGR00752] outer membrane lipoprotein, Slp family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.0101966 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTTT CGCGAGCACT ACTCGTGGTG TTGCTGGCCC TGGCGCTTGC CGCCTGTGCC
ACCGGCCCCC GCTACGACAC CGCTCAGGTT GATCCTGACC TGACGCCCCA ACGGCTGGCT
GCCGATGCCC CCGACCACGT GGACCAGCCG GTGGTCTGGG GCGGGGTCAT TGTCGCCAGT
GAGAACCTGG AGGATCGCAC GCGCCTGGAG GTGCTCGCCT ATCCCCTGGA CCGCAGCCAG
CGGCCCCGCA CCGGGCAACC CCCCCGGGGG CGATTCCTGG TCGAGCACCC GGGGTACCTG
GAGACGGCCG ACTACGCCCC CGGTCGCAGC CTGACCGTGC AGGGACAGGT GGACGAGGTG
GTGGACGGCC GCATTGGTGA GGCCGCTTAT CGCTACCCCC GGGTGGTGCC CGATGATCTC
CACCTGTGGC CACGTGCAGT GGAGGCCGAG CGTACCGCCC CGCGTGTCAG ATTCGGCGTG
GGGATTATAC TCACTAACTA G
|
|---|
| Protein sequence | MTVSRALLVV LLALALAACA TGPRYDTAQV DPDLTPQRLA ADAPDHVDQP VVWGGVIVAS
ENLEDRTRLE VLAYPLDRSQ RPRTGQPPRG RFLVEHPGYL ETADYAPGRS LTVQGQVDEV
VDGRIGEAAY RYPRVVPDDL HLWPRAVEAE RTAPRVRFGV GIILTN
|
|---|
| |