| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_2399 |
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| Symbol | |
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| ID | 4269986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | - |
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| Start bp | 2724552 |
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| End bp | 2726099 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638127157 |
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| Product | general secretory pathway protein E |
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| Protein accession | YP_743229 |
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| Protein GI | 114321546 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02533] general secretory pathway protein E |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.000178866 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTGCCGA CCATGAGCGC GGTGGACGAA CAACTGGATG CCTTGCAGGG CGGTGAGGGG
CCGCCGCCCA CGGTCTCGGA GCACCGTCCG GTCTCCTTCA ACTGGGCCCG GCGCCACGGT
GCCGTGCCGC TGGATTGGAG CGACGCGGCG GCCCGCATCG CCTGCCGCGC CGACGTCAGC
CCCCAGGCCC TGGTGGAACT GCGCCGCCAG CTCGGGCGGC CGCTGGCCCT GGAGGAGGTG
GATGACGAGA CCTTCAACCA GTACCTGCAG GCGTGCTACG AGCGCAGCGC CGGTGAAGCG
GCCGAGATGA TGGCCGGCCT CGGCGACGAC CTGGACCTGC ACAGCGTCGC CGAGCAACTG
GCCGAGCCCG AGGACCTGAT GGAGAGCGAG GATGATGCGC CCATCATCCG CCTCATCAAC
GCGCTGCTCA CCGAGGCCAT CAAGGAGGAC GCCTCCGACA TCCACATCGA GACCTTCGAG
CACCGCATGA CGGTGCGCTT CCGGGTGGAC GGCGTGCTGC GCGAGGTGTT GCAGCCGCCG
GTGGGCCTGG CCCCGCTGCT CACCTCCCGC ATCAAGGTCA TGGCCGAGCT CGACATCGCG
GAAAAGCGCC TGCCCCAGGA CGGCCGCATC TCCCTACGGG TGGCCGGCCG CGCCGTGGAC
GTGCGGGTCT CCACGCTGCC GGCCGGGCAG GGCGAGCGCG TGGTGTTGCG CTTGCTGGAC
AAGCGGGCCG GCCGGCTGGA TCTGACCCAC CTGGGCATGG AGCCGAAGAC CCTGCGGTGC
ATGGCCGATC TGGTCAACAA GCCGCACGGC ATCCTGCTGG TCACCGGCCC CACCGGGTCG
GGCAAGACCA CCACCCTCTA CGCCGCGATC AGCCGGATCA ACGACCGGCA GCGCAACATC
ATGACGGTGG AGGACCCCAT CGAGTACTAC CTGGACGGGG TCAGCCAGAC ACAGGTGAAC
ACCAAGGTGG ACATGACCTT CGCCCGCGGC CTGCGCGCCA TCCTGCGCCA GGACCCGGAC
GTGGTCATGA TCGGCGAGAT CCGCGACCTG GAGACCGCAC AGATCGCCGT CCAGGCCAGC
CTCACCGGCC ACCTGGTGCT CTCCACCCTC CACACCAACA CCGCCATCGG TGCGGTCACC
CGTCTGCGCG ACATGGGCGT GGAACCCTAC CTGCTCTCCT CCAGTATGCT GGGCATGATG
GCCCAGCGCC TGGTGCGGCT GCTCTGCCCG GAGTGCCGCC AGCCCTACAC CGCCGATGCC
ACGGAATGCG AACTGCTGGG CCTGGACCCG CAACACCCAC CCACCCTGCA CGCCCCGGTC
GGCTGCGACG CCTGCCATCA GACCGGCTAC CAGGGGCGCA CCGGCATCTA CGAGATCATC
GCCCTGGACG AAACCCTGCG CACCATGATC CACGACGGCG CCGGCGAGCA GCAGATGGAG
CACCACGCCC GCACCCTCAC CCCCAGCATC CGGGCCGACG GCGTCCGACG GGTGCTGTCC
GGCGAGACCT CTGTCGAGGA GGTCCTGCGG GTCACCCGCG AGGAATAG
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| Protein sequence | MLPTMSAVDE QLDALQGGEG PPPTVSEHRP VSFNWARRHG AVPLDWSDAA ARIACRADVS
PQALVELRRQ LGRPLALEEV DDETFNQYLQ ACYERSAGEA AEMMAGLGDD LDLHSVAEQL
AEPEDLMESE DDAPIIRLIN ALLTEAIKED ASDIHIETFE HRMTVRFRVD GVLREVLQPP
VGLAPLLTSR IKVMAELDIA EKRLPQDGRI SLRVAGRAVD VRVSTLPAGQ GERVVLRLLD
KRAGRLDLTH LGMEPKTLRC MADLVNKPHG ILLVTGPTGS GKTTTLYAAI SRINDRQRNI
MTVEDPIEYY LDGVSQTQVN TKVDMTFARG LRAILRQDPD VVMIGEIRDL ETAQIAVQAS
LTGHLVLSTL HTNTAIGAVT RLRDMGVEPY LLSSSMLGMM AQRLVRLLCP ECRQPYTADA
TECELLGLDP QHPPTLHAPV GCDACHQTGY QGRTGIYEII ALDETLRTMI HDGAGEQQME
HHARTLTPSI RADGVRRVLS GETSVEEVLR VTREE
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