Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mlg_2287 |
Symbol | clpX |
ID | 4268384 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alkalilimnicola ehrlichii MLHE-1 |
Kingdom | Bacteria |
Replicon accession | NC_008340 |
Strand | - |
Start bp | 2595034 |
End bp | 2596311 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638127046 |
Product | ATP-dependent protease ATP-binding subunit ClpX |
Protein accession | YP_743119 |
Protein GI | 114321436 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.16116 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 0.74961 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACA AAGACAACGG CAGAGACGAC GGCGGCAAGC TCCTTTACTG TTCTTTCTGC GGGAAGAGCC AGCACGAGGT CCGCAAGCTG ATCGCCGGGC CCTCGGTGTT TGTGTGTGAC GAGTGCGTCG AGCTCTGCAA CGACATTATC CGCGAGGAGC TGCAGGAGCA GTCCAGCTCC GCGGGGGCGG GCCTGCCGCG GCCTCACGAG ATCAACCAGG TGCTGGATGA GTTCGTGGTG GGGCAGGAGC ACGCCAAGAA GGTGCTCTCG GTGGCCGTCT ACAACCACTA CAAACGCCTC GAGGCGGGCA GCCGCAAGGA CGAGGTGGAG CTGTCCAAGA GCAATATCCT GCTCATCGGC CCCACCGGCT CGGGCAAGAC GCTGCTGGCC GAGACGCTGG CGCGCATGCT CAACGTGCCC TTCACCATTG CCGACGCCAC CACCCTGACC GAGGCGGGGT ACGTCGGTGA GGACGTGGAG AACATCATCC AGAAGCTGCT GCAAAAGTGC GATTACGATG TGGAGAAGGC CCAGCAGGGC ATCGTCTACA TCGACGAGAT CGACAAGGTC TCGCGCAAGG CGGACAACCC CTCCATCACC CGCGACGTCT CGGGCGAGGG GGTGCAGCAG GCGCTGCTCA AGCTGATCGA GGGCACCACG GCCTCGGTGC CGCCCCAGGG CGGCCGCAAG CACCCGCAGC AGGAGTTCCT GCAGGTGGAC ACCGGCGGCA TCCTGTTCAT CTGCGGCGGC GCCTTCGCCG GCCTGGACAA GGTCATCCAG GACCGTTCCG AGAAGGGCGG TATCGGCTTC TCCGCCGAGA TCAAGTCCAA GGACGAGAAG CGCTCGGTGG GTGAGACCCT GCAGGACGTG GAGCCCGAGG ATCTGGTCAA GTACGGCCTG ATCCCGGAGT TTGTCGGCCG CCTGCCGGTG GTCGCCACCC TGGAGGAGCT GGACGAGCAG GCCCTGGTGG AGATCCTCTC CGCGCCCAAG AACGCCCTGG TCAAGCAGTA CCAGAAGCTG TTCGAGATGG AGGGTGTGGA GCTGGAGTTC CGCGAGGACG CCCTGCGCGC CGTGGCCCGC AAGGCCATGG ACCGCAAGAC CGGTGCCCGC GGCCTGCGCA CCATCCTCGA GCACGTGCTG CTGGACACCA TGTACGATCT GCCCTCCATG GAGAACGTTG AAAAGGTGGT GGTGGACGAC GCCGTGATCC GCGGCGAGAC GCGGCCCTAC ATCATCTACG GCAATCAGGA GCAGTCGCGG GCGGCTTCCT CCGACTGA
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Protein sequence | MTDKDNGRDD GGKLLYCSFC GKSQHEVRKL IAGPSVFVCD ECVELCNDII REELQEQSSS AGAGLPRPHE INQVLDEFVV GQEHAKKVLS VAVYNHYKRL EAGSRKDEVE LSKSNILLIG PTGSGKTLLA ETLARMLNVP FTIADATTLT EAGYVGEDVE NIIQKLLQKC DYDVEKAQQG IVYIDEIDKV SRKADNPSIT RDVSGEGVQQ ALLKLIEGTT ASVPPQGGRK HPQQEFLQVD TGGILFICGG AFAGLDKVIQ DRSEKGGIGF SAEIKSKDEK RSVGETLQDV EPEDLVKYGL IPEFVGRLPV VATLEELDEQ ALVEILSAPK NALVKQYQKL FEMEGVELEF REDALRAVAR KAMDRKTGAR GLRTILEHVL LDTMYDLPSM ENVEKVVVDD AVIRGETRPY IIYGNQEQSR AASSD
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