Gene Mlg_2228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlg_2228 
Symbol 
ID4269443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlkalilimnicola ehrlichii MLHE-1 
KingdomBacteria 
Replicon accessionNC_008340 
Strand
Start bp2531388 
End bp2531915 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content70% 
IMG OID638126984 
ProductOstA family protein 
Protein accessionYP_743060 
Protein GI114321377 
COG category[S] Function unknown 
COG ID[COG1934] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03002] lipopolysaccharide transport periplasmic protein LptA 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTGCC ATAACCGCGC CGCCACCTTG CTGGCCGGCC TGCTCTGTCT GCTGCTGGCC 
ACCGGGGGGC AAGCCCGTAC CCCCGACCGC GACCGGCCCA TTGATCTGGA GGCCGACCGC
GCCGAGATCG ACAACGTCCG CGGCATCAGC ACCTACACCG GCGCTGTCGT GTTGACCCAG
GGCAGCCTGG TCATCACCGG CGATCGCATG GTTGTGCACA CCCGCGACGT GGAGGGGCGC
CGCGTTCTGG ACCGGGTGGA GGTGGCGGGC GGCCCGGCCA CCTACGAGCA ACTGCCCCCG
GGGCAAACCG ACACGGTGCA TGCCGAAGCC CCGCGCATGG AGTACCACAG TCGCGGGCCG
CAGCGCCTGC ACCTGTCCGG AGGGGCCGAA CTCTGGCAGC GGGAGAACCG CATGTCCGGC
GACGAGATCC GCGTCAATCT GGAGACCCAG GAGGCAGTGG TCGAGGGCCG GGAGGACCGG
CGCACCCGCA CCATCTTCTA CCCGGCGGAG GAGCGGGACG AGGAATGA
 
Protein sequence
MNCHNRAATL LAGLLCLLLA TGGQARTPDR DRPIDLEADR AEIDNVRGIS TYTGAVVLTQ 
GSLVITGDRM VVHTRDVEGR RVLDRVEVAG GPATYEQLPP GQTDTVHAEA PRMEYHSRGP
QRLHLSGGAE LWQRENRMSG DEIRVNLETQ EAVVEGREDR RTRTIFYPAE ERDEE