Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mlg_2195 |
Symbol | murD |
ID | 4270974 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alkalilimnicola ehrlichii MLHE-1 |
Kingdom | Bacteria |
Replicon accession | NC_008340 |
Strand | - |
Start bp | 2500728 |
End bp | 2502077 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 638126951 |
Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
Protein accession | YP_743027 |
Protein GI | 114321344 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.253495 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGCAG TGAAACGGCA AGCAGGATAC CGCGCGGTGG TTGGCCTCGG CCGCACCGGG CTGGCCTGTG TCCGTTTCCT GGCCGCCCGC GGGCTCGATG TGTGCGTCAC CGACAGCCGC GACGAGCCGC CGGAGCAGGC CACCCTGCAA CGGGAATGGC CGCAGGTGCC GGTGCGCGCG GGCGGCTTCG ACGCCGCCCT GCTGGCGGGC GCCGGGGAGA TCATCGTCAG TCCCGGGGTC AGTCTCCGGG AGCCGGCGCT GGAGACCGCC CGCCGGGCCG GTGTGCCGTT GATCGGCGAG ATCGAGCTGT TTGCCCGTCA CGCCGATGCG CCGGTGGCGG CGATCACCGG CTCCAATGGC AAGAGCACGG TCACCACCCT GGTGGGGCGA ATGGCCGAGG CGGCGGGCCG GCGGGTGGCG GTGGGCGGCA ATCTGGGCAC CCCGGCACTG GCACTGCTGG ATGGGGAGAC CCGGCCCGAT GCCTACATTC TGGAGCTCTC CTCCTTTCAG CTCGAGACCA CCCACAGCCT GGCCCCCCGG GTGGCGGCGG TGCTCAACAT CAGCGCCGAC CACATGGACC GCCACGGCAG TGTCAGCGCC TACGCCGGGA TCAAGGCGCG TATCTTCCAC GGCGCCGGCG TCCAGGTGCT CAACCTGGAC GATCCGGTGG TGGCCGCCAT GGCGCAACCC GGCCGCACGG TCCTGGGCTT CAGCCTGGCG TCCAACCCGC GCCGGGGGGC CGGCGTGGCC GACCACCGGG GCGCCCCGTG GCTGCACCTG AATGGTGAGC CGGTCCTGCC GGCGGCGGAC CTGCGGCTGC CCGGGCTGCA CAACCGCGCC AACGCCCTGG CCGCCCTCTG CCTGGGGCAG GGACTGGGCC TGCCGGTGGC GGCGATGGCC GAGGCGCTGC GCCGTTTCAC CGGCCTGCCC CACCGCACCG AATGGGTGGC CGAGCACGCC GGTGTGCGCT GGTACAACGA CTCCAAGGGG ACCAATGTGG GGGCGGCCGT GGCCGCCATC CGTGGCCTGG CGGGCCCGGT GGTGCTGATC GCCGGCGGCG ACGGCAAGGG GGCCGACTTC TTGCCGCTGG CCGACGCGCT TCGCGAGAAG GGCCGGGCGG CGGTGCTGAT CGGCCGGGAC GCCCCGCGCC TGGCGCAGGT GCTCTCCGGG GTGGTGCCGG TGGAGCGGGC CGCGGATATG AGGGACGCCG TGCGCCGGGC GGCCAACCTG GCCCGGTCCG GCGACGCGGT GCTGCTGTCG CCCGCCTGTG CCAGCTTCGA TATGTTCCGG GGCTTCGAGC ACCGGGGTGA GGCCTTCCGC GACGCGGTAC GGGAGGTGGC CCATGGCTGA
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Protein sequence | MQAVKRQAGY RAVVGLGRTG LACVRFLAAR GLDVCVTDSR DEPPEQATLQ REWPQVPVRA GGFDAALLAG AGEIIVSPGV SLREPALETA RRAGVPLIGE IELFARHADA PVAAITGSNG KSTVTTLVGR MAEAAGRRVA VGGNLGTPAL ALLDGETRPD AYILELSSFQ LETTHSLAPR VAAVLNISAD HMDRHGSVSA YAGIKARIFH GAGVQVLNLD DPVVAAMAQP GRTVLGFSLA SNPRRGAGVA DHRGAPWLHL NGEPVLPAAD LRLPGLHNRA NALAALCLGQ GLGLPVAAMA EALRRFTGLP HRTEWVAEHA GVRWYNDSKG TNVGAAVAAI RGLAGPVVLI AGGDGKGADF LPLADALREK GRAAVLIGRD APRLAQVLSG VVPVERAADM RDAVRRAANL ARSGDAVLLS PACASFDMFR GFEHRGEAFR DAVREVAHG
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