| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_2080 |
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| Symbol | |
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| ID | 4269399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | + |
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| Start bp | 2358221 |
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| End bp | 2359474 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638126836 |
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| Product | type II secretion system protein |
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| Protein accession | YP_742912 |
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| Protein GI | 114321229 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.917677 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.551071 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGTCG CCACCGCAAA GAAAGCCAGT CGCAAGAAGC CCAGGCAGCA ACCCGTGTTC
AACTGGGAGG GCACCGACAA GCGCGGCGCC AAGGTCAAGG GCAGCATGCA CTCGGAGAAT
GCCCTGGCGC TGAAGGCCGA GCTGCGCCGC CAGGGCATCA TCCCCTCCAA GGTGCGCAAG
CGCTCCGCGC TGGAGGACCT GCTCAGCGGC GGCAACAAGA AGATCAAGCC GGCGGACATC
GCCTATTTCA GCCGCCAGCT CGCCACCATG CTGCAGTCCG GCGTGCCGCT GGTTCAGGCC
CTGGATATCG TCGGCAAGGG GGACGAGCAC GCCGGCATGC GCCAGCTCGT GGCGGAGATC
AAGAACGATG TGGAGTCGGG CACGGCCCTG CACACCGCCC TACAGAAGCA CCCGCGCTAT
TTCGATGACC TGTTCGTCAG TCTGGTGGCG GCCGGGGAGT CCGCGGGGGT GTTGGACACC
CTGCTGGACA AGATCGCCAC CTACAAGGAA AAGACCGAGT CGATCAAGGG CAAGATCAAG
AAGGCCCTGT TCTACCCCAC GGCGGTGATC GTGGTGGCCA TCGTGGTCAC CGCCATCCTG
CTGATCTGGG TCGTGCCGCA GTTCGAGTCG CTGTTCCGCG GCTTCGGTGC CGACCTGCCG
TTGTTCACCC AGATGGTGAT CAACCTGTCG GACTTCATGC AGAGCTACTG GTTCATCATG
CTGGCCGCGG CCATCGGGCT GGGCTGGGGG TTCAGCACCG CCAAGCGACG ATCGAAGGCC
TTCTCACGCA GCGTGGACCG GTTTTCGCTG AAGATCCCTG CCATCGGCAA CATCCTTTAC
AAGGCCTCGG TGGCCCGCTT CGCCCGTACC CTCGCCACCA TGTTCGCCGC CGGGGTGCCC
CTGGTGGAGG GGCTGCGCTC GGTGGCCAGT GCCACCGGCA ACTATGTGTT CGAGTCAGCG
GTGCTGCAGA TTCGCGAGCA GGTGGCCGCC GGCCAGCAGC TGCAGATCTC CATGCGACTG
TCCAATCTCT TCCCCAATAT GGCCATCCAA ATGGTGGCCA TCGGCGAGGA GTCCGGCTCG
TTGGACAGCA TGCTCGCCAA GGTGGCCGAC TACTACGAGG AGGAGGTGGA CAACGCCATC
GATAGCCTCA GCAGCCTGCT GGAGCCGATG ATCATGGCGA TCCTCGGCAT CCTGGTGGGC
GGACTGGTCA TCGCCATGTA TCTGCCCATC TTCCAGATGG GCGCCGCCAT CTGA
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| Protein sequence | MAVATAKKAS RKKPRQQPVF NWEGTDKRGA KVKGSMHSEN ALALKAELRR QGIIPSKVRK
RSALEDLLSG GNKKIKPADI AYFSRQLATM LQSGVPLVQA LDIVGKGDEH AGMRQLVAEI
KNDVESGTAL HTALQKHPRY FDDLFVSLVA AGESAGVLDT LLDKIATYKE KTESIKGKIK
KALFYPTAVI VVAIVVTAIL LIWVVPQFES LFRGFGADLP LFTQMVINLS DFMQSYWFIM
LAAAIGLGWG FSTAKRRSKA FSRSVDRFSL KIPAIGNILY KASVARFART LATMFAAGVP
LVEGLRSVAS ATGNYVFESA VLQIREQVAA GQQLQISMRL SNLFPNMAIQ MVAIGEESGS
LDSMLAKVAD YYEEEVDNAI DSLSSLLEPM IMAILGILVG GLVIAMYLPI FQMGAAI
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