| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_2078 |
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| Symbol | |
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| ID | 4269397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | + |
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| Start bp | 2355631 |
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| End bp | 2356311 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638126834 |
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| Product | rhomboid family protein |
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| Protein accession | YP_742910 |
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| Protein GI | 114321227 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.347543 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.269308 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCC CGCACCCCCG TTTTATGCTG TTTCCGCCGG TCATCACCTT CCTGCTGACC
GTCAACGGGT TGGTGTTTCT GCTCCAGGGC TTCATGGGGC CGACACTGAT CACCCACTTC
GCGCTCTGGC CCCTGGGCAC CCCCGACACC ATGCCCTTCA GGGGTATGCT CACCCAGGTG
CCGGAGTTCC AGGTCTGGCA GCTGCTGACC TACGGCTTTC TCCACGGGGG CCTGTTTCAC
CTGGTGGTCA ACCTGTTCGC CATGTGGATG CTGGGGGTGC AGGTGGAGAA CGCCTGGGGA
TCCCGGCTGT TCGCGATCTA TTTTCTCGTC TGCGTGGTCG GAGCCGGTCT CGTGCAACTG
GTGGTGGCCA CCCAGATGGC CGCCGACGGC GCCATCTACC CTACCGTCGG GGCCTCAGGC
GGGGTTTTTG GTATCCTGCT CGCCTTCGGC ATGATGTTCC CCAACCAGCG TCTGATGCTG
ATCTTCCTGC CGATCCCGAT CAAGGCCAAG TACTTTGTCA TGGCCTACGG GGCCTTTGAG
CTGTTTGCCG GCATCACCCG CACCGATGCC GGTATCGCCC ATTTCGCCCA CCTGGGTGGC
ATGGTGGTGG GGCTGCTGTT GATCCAGTAC TGGCGGGGGC GCCTGCCCAT CAAGCCGCGC
CGGCAGGTCT TCTGGTGGTA G
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| Protein sequence | MSTPHPRFML FPPVITFLLT VNGLVFLLQG FMGPTLITHF ALWPLGTPDT MPFRGMLTQV
PEFQVWQLLT YGFLHGGLFH LVVNLFAMWM LGVQVENAWG SRLFAIYFLV CVVGAGLVQL
VVATQMAADG AIYPTVGASG GVFGILLAFG MMFPNQRLML IFLPIPIKAK YFVMAYGAFE
LFAGITRTDA GIAHFAHLGG MVVGLLLIQY WRGRLPIKPR RQVFWW
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