| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_2017 |
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| Symbol | |
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| ID | 4269617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | - |
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| Start bp | 2289957 |
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| End bp | 2292278 |
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| Gene Length | 2322 bp |
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| Protein Length | 773 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638126773 |
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| Product | (NiFe) hydrogenase maturation protein HypF |
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| Protein accession | YP_742849 |
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| Protein GI | 114321166 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0068] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00143] [NiFe] hydrogenase maturation protein HypF |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCGG TCAGCCGGCA TTCGGTGCCC AAGCGTCTGG CAGTCCGCGT ATGCGGCCGG
GTCCAGGGTG TGGGCTTCCG GCCTTTCGTC AAGTGCCTTG CTGACAGCTG CAACGTTAGT
GGTTGGGTCC GCAACGATGC GGGCGGCGTC AGCCTGGAGG TCCAGGGAGG CGGGTCGCAG
CTTGCCCGGT TTATGGTGGC TCTGCGAGAG CAGGCACCGC CCCTGGCCCG CATCGAGGCG
GTGGTAGAGA ACCCCTGCCC TTTGCAGCCC CGGGAGCGTG GGTTTCGTAT CCGGCCCAGC
AGCGGCGGTG CGGTGGCAAC CGAAATCACG CCGGATGCGG CGGTTTGTGA TGCCTGTCTC
GAAGAGCTGT TCGATCCGGC AGACCGGCGC TACCGTTACC CTTTTATCAA CTGCACCCAC
TGCGGCCCAC GGTACACACT CACCTCCGGA CTGCCCTACG ACCGGGTCCG GACCAGCATG
GCCAAATTCC CCCAATGCCC CCGGTGTCTG GCGGAGTATG AGGACGCCGG CGATCGCCGG
TACCATGCCC AGCCGAATGC CTGCCCGGAG TGCGGCCCCA GTCTGCAACT ACTTGACGGT
GACGGACATC CGCTGCCCGT GGGGGACGTA CTTGCGGCCA CGGTCGACCG GTTGACCAGC
GGACAGATCC TCGCGATCAA AGGGTTGGGC GGCTTCCATC TCCTGTGCGA TGCCGGAAAC
CCGGAAGCTG TTGCGCGTCT GCGGACCCGC AAACGGCGGT CCGAGAAGCC CTTCGCCGTC
ATGGTCCCCG GCATTGAGGC AGCCGAGAGG CTGGTACGAC TGGCCCCAGG CGAGCGCCAC
CTGCTGGCGG GCGTCGACCG TCCAATCCTG CTGGCTGGGA AGCGTCCCAC CGTGGATCGG
CAACTGCCTG GCGTGGCGCC AGGGATGCCT TGGCTGGGCG TGATGTTGCC GTATACGCCT
TTGCATTACC TGCTGTTTCA CGAAGCCGCC GGACGCCCGA TGGGATTGGC TTGGTTGTCC
GGCACCGGGC AGCCGGTGTG GGTCTGTACC TCCGCCAACC CTGGCGGAGA GCCTCTGGTC
ACGGATAACC AGGACGCTGT GCGCCGTCTT TCTGGCCTGG CGGATGCGCT GCTGGTGCAT
GACCGGGACA TTCTGGTGCG TTGCGACGAC AGCGTGGTTC GTCAGGCAGA GGGACGGGCC
GTGTACCTTC GCCGTGGCCG GGGGGTCACC CCATCGCCGA TCCGATTGCC CCGTGGCGGG
CCGCCGGTCC TCGCTACCGG CGGCCATCTG AAGAACACCG TTTGCCTGAC ACGCGGTGAC
CAGGCGTACA TATCCCAGCA CGTTGGGGAT CTGGACAACG CCGCTACCTG TCGAGCCTTG
GACGACACCG TAGCCCATCT GCAGAGGGTG TTGGCGGTCA GGCCCGACTG CGTCGCCTGT
GACCGTCATC CTGATTTTTA CAGCAGTGCC CTGGCTGCCC GCTTAGCGGC GGAGTGGGCG
ATCCCCTTGG TCAGGGTGCA GCACCATCAT GCGCATCTGG CCGCAGTGCA GGCCGAGCAT
GGCCTGGAAG GCCCGATGTT GGGTGCAGCA CTGGATGGCG TGGGGTTTGG GGATAACGGC
GAGCCCTGGG GGGGCGAACT GCTCGCCCTT GATGGTAGGG GCGGCTTTCG CCGCCTTGGT
TTCCTGCGCC CTCTGCCTTT GCCGGGGGGG GACCGGGCTG CCCGGGAACC CTGGCGCATG
GCTGCGGCCG CGCTGCACGA GCTCGGTTGG GGCGAGCGGA TTCCCGCATG GTTCCCGGAA
CATCCCCGTG CACAAGGGCT GGCCGGAATG CTGGCTACGG GCACCCGCTG CCCGCGGACC
AGTAGCCTTG GACGCTTGTT CGATGCCGCG GCGGGCCTAC TCAAGGTGAA GGCGGTCAGC
CGGTTCGAGG GACAGGCCGC CATGCTGCTC GAAGGTCTTG CTGCCGAGCA TGGGGCGGTT
CCGGCATGGG AGGGGGGCTG GACGTTGGAT CAGGAGGGGC TCGACTTTCG TCCCTTGCTT
GCGGAGCTGA CCCGGAGCTC GGAACGCGGG TTCGGAGCTG CTCTGTTCCA CGCCACGCTG
GCTGCCGGCC TGGCTGACTG GTTGTGTCGG GCGGCAGAGA AAGCAGGGCA GAAACGAGTG
GCGATCGCGG GAGGGTGCTG TGCCAATCAG GTGATGATGC GCGATCTTTG CATGCGACTG
GAACACGCTG GCCTGAGTGT ATACCAGGCC CGACAGGCGC CGCCCAACGA CGCCGGGTTG
AGTCTTGGAC AAGCCTGGGT GGCGTTACAA ACCGTGAGGT AA
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| Protein sequence | MNAVSRHSVP KRLAVRVCGR VQGVGFRPFV KCLADSCNVS GWVRNDAGGV SLEVQGGGSQ
LARFMVALRE QAPPLARIEA VVENPCPLQP RERGFRIRPS SGGAVATEIT PDAAVCDACL
EELFDPADRR YRYPFINCTH CGPRYTLTSG LPYDRVRTSM AKFPQCPRCL AEYEDAGDRR
YHAQPNACPE CGPSLQLLDG DGHPLPVGDV LAATVDRLTS GQILAIKGLG GFHLLCDAGN
PEAVARLRTR KRRSEKPFAV MVPGIEAAER LVRLAPGERH LLAGVDRPIL LAGKRPTVDR
QLPGVAPGMP WLGVMLPYTP LHYLLFHEAA GRPMGLAWLS GTGQPVWVCT SANPGGEPLV
TDNQDAVRRL SGLADALLVH DRDILVRCDD SVVRQAEGRA VYLRRGRGVT PSPIRLPRGG
PPVLATGGHL KNTVCLTRGD QAYISQHVGD LDNAATCRAL DDTVAHLQRV LAVRPDCVAC
DRHPDFYSSA LAARLAAEWA IPLVRVQHHH AHLAAVQAEH GLEGPMLGAA LDGVGFGDNG
EPWGGELLAL DGRGGFRRLG FLRPLPLPGG DRAAREPWRM AAAALHELGW GERIPAWFPE
HPRAQGLAGM LATGTRCPRT SSLGRLFDAA AGLLKVKAVS RFEGQAAMLL EGLAAEHGAV
PAWEGGWTLD QEGLDFRPLL AELTRSSERG FGAALFHATL AAGLADWLCR AAEKAGQKRV
AIAGGCCANQ VMMRDLCMRL EHAGLSVYQA RQAPPNDAGL SLGQAWVALQ TVR
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