Gene Mlg_1887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlg_1887 
Symbol 
ID4269742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlkalilimnicola ehrlichii MLHE-1 
KingdomBacteria 
Replicon accessionNC_008340 
Strand
Start bp2150382 
End bp2150858 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content66% 
IMG OID638126643 
ProductBadM/Rrf2 family transcriptional regulator 
Protein accessionYP_742721 
Protein GI114321038 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator)
[TIGR02010] iron-sulfur cluster assembly transcription factor IscR 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.342013 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTAT CGACCAAGGG CCGCTACGCG GTCACAGCCA TGATGGATCT TGCCCTCCAC 
GAGGGGCAGG GGCCAGTCAC TCTGGCGGAC ATCTCCGAGT CACAGGGGAT CTCCTTGTCC
TATCTGGAGC AGCTCTTTGC CCGGCTGCGC AAGCACTCGC TGGTGTCCGG GGTGCGGGGG
CCCGGCGGCG GTTATCGCCT GGCCCAGCCC GCGGATCAGA TCACCATTGC CGATATCATT
ACGGCCGTGG ACGAGAACGT GGATGCCACA CGCTGCAAGG GGCGGGGTGA TTGCCAGGAG
GGTGAGCGCT GCCTGACCCA TGATCTGTGG ATGGACCTGA GCCGCCAGAT CTACGACTTC
CTGAACGGCA TTACCCTGGC GCAGTTGGCC CAGGAGCCGG CGGTTCGTCG GGTTGCCGAG
CGCCAGGGTC TGGCCGAGCA GCCGCTGGCC GACCGGCGCC GGACCGCGCG CGGCTGA
 
Protein sequence
MKLSTKGRYA VTAMMDLALH EGQGPVTLAD ISESQGISLS YLEQLFARLR KHSLVSGVRG 
PGGGYRLAQP ADQITIADII TAVDENVDAT RCKGRGDCQE GERCLTHDLW MDLSRQIYDF
LNGITLAQLA QEPAVRRVAE RQGLAEQPLA DRRRTARG