Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mlg_1643 |
Symbol | |
ID | 4270365 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alkalilimnicola ehrlichii MLHE-1 |
Kingdom | Bacteria |
Replicon accession | NC_008340 |
Strand | + |
Start bp | 1880357 |
End bp | 1882057 |
Gene Length | 1701 bp |
Protein Length | 566 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638126401 |
Product | ABC transporter related |
Protein accession | YP_742479 |
Protein GI | 114320796 |
COG category | [C] Energy production and conversion [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4988] ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components |
TIGRFAM ID | [TIGR02857] thiol reductant ABC exporter, CydD subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.564433 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCAACA AAGTGGATAA ACAACGGGCC CGCCATTGGC TGGCCCAACG GGCACGGCCA GCCCGGAACC TGCTGGTCTT GGCCAGCGGG GCCGGATTGA CCCAAGGCCT TCTGATCATA CTGCAATCGG CGCTCATCGC CCATGTGGTG CACGCCGCCG TGATCGAGGA AGTGCGCCTG GACACCCTCT GGCCGGCCCT GCTCGGGCTG CCGGTGATCT TCCTCGTTCG GGCGGTCTGC GCCTGGGGCC AGGAGGTGGC CGGCGTCCGG GCCGCCACGC GCATCAAGGA CCGGTTGCGC GAAGAGCTGT ATGCGCATCT GCTGGCCCTC GGCCCGGTCG GCCTGGGCGT GCGCCAGAGC GGGACAGTGT CCACCGCCCT GCTTGAGCAG GTGGAGGCAC TTGAGGGCTA CTACGCCCGC TTTTACCCGC AGATGATCAT CGCCGTGGGC GTCCCCCTCC TCATCCTGCT GGTGGTCTTC CCGCTGGACT GGCTGGCGGC ACTGCTGCTG TTGTTCACCG CCCCGCTGAT CCCCCTGTTC ATGGCCCTGG TGGGGTTCGG CGCGGAACAA CTGCAGCAGC AGCAACTGGT GGCCTTGGGG CGGCTCTCCG GCTGGATGCT GGACCGCATC ACCGGCCTGA CCACCCTCCG GCTGTTCGGC CACACAGGGC ATGACCAAGC CCGCCTGCGG GAGGCCTCGG ACGACTTCCG CCAACGTACC ATGAAAGTCC TGCGGGTGGG GTTCCTCTCC TCGGCGGTGC TGGAGTTTTT CGCCTCCGTA GCCATCGCCA TGTTGGCCAT CTATATCGGC CTGGGCCTGC TCGGCTATAT CACCTTCGGT CCCTCCCCGG AGCTGACGCT GTTCAGCGGT TTGTTCATCC TGCTGCTGGC CCCGGAGTTC TTCCAGCCGT TGCGCACCCT AGCCACCCAT TACCACGACC GGGCCGGCGC CATCGGGGCG GCCGAGGAGC TGATCGAGTT GCTGGAGACG CCGCCGATCC GCCCGGTGAA CGGCAACCGG CGGCCCACGC TGGACGGCCC CCCGGCCTTG CGCCTGGAGG GGGTCAGCGT CACGCTCCCC GGCGGCGTCA CCGCCCTGCG CGACTGCAGC ATGAATGTCG CCCCCGGTGA GCGGGTCGTA GTGGCCGGGC CGAGCGGTTG CGGCAAGTCC ACGCTCATCC ACCTACTACT GGGGCTGGTG GAGGGGCAAG GCGATATCCG CCTGAACGGC CACCCGCTGC GGGACCTGGA CCCGACCTGG CTGCGGGAAC ACGTGGCCTG GGTGGGCCAG CGCGCCCACC TGTTCCACGG CACCCTCGCC GACAATATCG CCCTGGGCTA CCCGGGCGCC CCCCGCGACC AGATCGAGGC GGCGGCGCGC AAGGCGCGGG TCACCGCCTT CAGCCGATTA CTGCCCGCCG GCCTGGACAG CCGCATCGGG GAACGGGGCG AGGGCCTCTC CGGCGGCGAG GCGCAGCGCG TGGCGGTGGC CCGCGCCCTG CTCCGCGATA CCCCATTGTT GCTGCTGGAC GAACCCACGG CACACCTGGA TCCGGAGAAC GAGCAGGCCC TGCTGGCCAC CCTCGCCGAG GCGGCCGAGG GCCGGACGGT GATCATGACC ACACACCGCC CGGCAGGCAT GGCGTGGGCG GACCGGGTGC TGACCCTGCG GGATGGACAA CTGCGGGAGG CGACGCCATG A
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Protein sequence | MSNKVDKQRA RHWLAQRARP ARNLLVLASG AGLTQGLLII LQSALIAHVV HAAVIEEVRL DTLWPALLGL PVIFLVRAVC AWGQEVAGVR AATRIKDRLR EELYAHLLAL GPVGLGVRQS GTVSTALLEQ VEALEGYYAR FYPQMIIAVG VPLLILLVVF PLDWLAALLL LFTAPLIPLF MALVGFGAEQ LQQQQLVALG RLSGWMLDRI TGLTTLRLFG HTGHDQARLR EASDDFRQRT MKVLRVGFLS SAVLEFFASV AIAMLAIYIG LGLLGYITFG PSPELTLFSG LFILLLAPEF FQPLRTLATH YHDRAGAIGA AEELIELLET PPIRPVNGNR RPTLDGPPAL RLEGVSVTLP GGVTALRDCS MNVAPGERVV VAGPSGCGKS TLIHLLLGLV EGQGDIRLNG HPLRDLDPTW LREHVAWVGQ RAHLFHGTLA DNIALGYPGA PRDQIEAAAR KARVTAFSRL LPAGLDSRIG ERGEGLSGGE AQRVAVARAL LRDTPLLLLD EPTAHLDPEN EQALLATLAE AAEGRTVIMT THRPAGMAWA DRVLTLRDGQ LREATP
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