Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mlg_1561 |
Symbol | |
ID | 4269935 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alkalilimnicola ehrlichii MLHE-1 |
Kingdom | Bacteria |
Replicon accession | NC_008340 |
Strand | + |
Start bp | 1785882 |
End bp | 1786631 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638126318 |
Product | putative PAS/PAC sensor protein |
Protein accession | YP_742398 |
Protein GI | 114320715 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3279] Response regulator of the LytR/AlgR family |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.925231 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCAGAGC CCCCGATGCA AAGCTTCGAG CACAAACTGC AGCAATTCGA TCCCGGGGTC ATCTGGCTCG ACGACGACAA CCAGGTGACG GCCATGAACG CGGTAGCCAG CCGCATCCTG GGCGTGCGCC CGGGCGAGGT GCTGGGTCAG GAGGTATTGC AACTGCACCC GGAGAAAAGC CGCGGCAAGA TCGCTTGGCT GTTGGAATCG ACCCACGCGG CCGATGGCTG TCCGGTCAAA TCACCGCCGC CCATGACCAT GATGATCAAC ATCCCCGACC GGGTCCTGTT GATCAAGCTG TCACGGATGT ACGGCCCGGA GGGCCGGGCG GCGGGCGCTT GCCTGGTCTT TTACGACCTC ACCGAGGTGA CCTCCCGCGA GGCGCCCCGG GACCCCGTGG CACCACGTCC CCGGCAATTG CTGAAGCTAC CCGTCTACAA GAACCAACGG GTGGTGCTGC TGAACCTGGA GCAGGTGGTG CGCATGCGCG CCGAGGGCCA CTACACCGAG GTCTTCCAGG ACGGCGAGCA CTTCCTCTGC AACCTGTCCC TCGCCGATCT GGAGGGGCGC CTGGACCCGA CGCGCTTCAT GCGCGTGCAC CGCTCCCACA TGGTCAACCT GCATTTCGCC GTCGCCCTCG AAAAAGAGGG CGAGCAGTAT CAGCTCGTGC TGCAGGACCG CAATGAGACC CGCATCCCGG TTAGCCGCGG CAACGCCCCC CGGGTCCGCG CCCTGTTCGG CCTGGCCTGA
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Protein sequence | MAEPPMQSFE HKLQQFDPGV IWLDDDNQVT AMNAVASRIL GVRPGEVLGQ EVLQLHPEKS RGKIAWLLES THAADGCPVK SPPPMTMMIN IPDRVLLIKL SRMYGPEGRA AGACLVFYDL TEVTSREAPR DPVAPRPRQL LKLPVYKNQR VVLLNLEQVV RMRAEGHYTE VFQDGEHFLC NLSLADLEGR LDPTRFMRVH RSHMVNLHFA VALEKEGEQY QLVLQDRNET RIPVSRGNAP RVRALFGLA
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