| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1461 |
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| Symbol | ispG |
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| ID | 4270242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | + |
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| Start bp | 1667469 |
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| End bp | 1668716 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638126217 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_742300 |
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| Protein GI | 114320617 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.0743791 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGAGA CCAGCAGCCA GCACCCGAGA CGCCGCAGCG TGCCCGTGCC CGTAGGCCCG
GTCACCATTG GCGGCAACCA CCCCATCGTG GTCCAGTCGA TGACCAACAC CGATACCGCC
GATGACATCC GCACGGTGGT GCAGGTGGCC GAGCTGGCAC GGGCGGGCTC GGAAATTGTC
CGGCTCACCG TCAACAACGA CGAAGCGGCG GCGGCGGTTC CGCACATCCG CGAGCGGCTG
GATGCCATGG GCCTGGAGGT GCCCCTGGTC GGTGACTTCC ACTTTAACGG CCACAAGCTG
CTGGCGAAAC ACCCCGCCTG TGCCGAGGCA TTGGCCAAGT TCCGCATCAA CCCCGGCAAT
GTCGGCAAGG GCCGTCGCCG GGACCCGCAG TTTGCCGAGA TGATCGAGTT CGCCTGTCGC
TACGACAAGC CGGTACGCAT CGGCGTCAAC TGGGGCAGCC TGGACCAGGA TCTGCTGGCC
GCGATGATGG ATGAGAATGC GGCTCTCCCC CGCCCGCTCC CACCGGAGCA GGTGATGAAG
CAGGCGGTGA TCGCCTCCGC ACTGCAGAGC GCGGAGAAGG CCGAGGCCCT CGGCCTGCCA
CGGGAGCGGA TCGTGCTCTC CTGCAAGATG TCCGGCGTCC AGGACTTGAT CGAGGTCTAC
CGCGATCTCG CGGCCCGCTG CGACTACGCT CTGCACCTGG GCCTCACCGA GGCCGGTATG
GGCTCCAAGG GCATTGTCGC CTCCACTGCC GCGCTGGCGG TCCTGCTGCA GGAGGGGATC
GGCGACACCA TCCGGGTCTC CCTCACCCCG GAGCCGGACC AGCCCCGCAC CGACGAGGTG
GTGGTTGCCC AGCAGATCCT GCAGACCATG GGCCTGCGCG CCTTCACCCC CATGGTCACC
GCCTGCCCCG GCTGTGGCCG GACCACCAGC ACCTACTTCC AGGCGCTGGC CCGCGACATC
CAGGCTCACG TCCAGCGGCG TATGCCGGAG TGGCGTCGTA CCTATCCGGG GGTCGAGAAC
CTGACCCTGG CGGTGATGGG TTGCGTGGTC AACGGTCCGG GCGAGAGCCG GAACGCCGAT
ATCGGCATCA GCCTGCCCGG TACCGGAGAA CGGCCCGTGG CCCCGGTCTA CGTGGATGGC
GAGAAAACAG TGACCCTGAA GGGCGAGCGT ATCGCCGAAG AGTTCCAGGC CATCGTCGAA
GACTATATCG AGGACCGCTT CGGGCAGCAG CGGGCCGGCG ACCGCTGA
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| Protein sequence | MPETSSQHPR RRSVPVPVGP VTIGGNHPIV VQSMTNTDTA DDIRTVVQVA ELARAGSEIV
RLTVNNDEAA AAVPHIRERL DAMGLEVPLV GDFHFNGHKL LAKHPACAEA LAKFRINPGN
VGKGRRRDPQ FAEMIEFACR YDKPVRIGVN WGSLDQDLLA AMMDENAALP RPLPPEQVMK
QAVIASALQS AEKAEALGLP RERIVLSCKM SGVQDLIEVY RDLAARCDYA LHLGLTEAGM
GSKGIVASTA ALAVLLQEGI GDTIRVSLTP EPDQPRTDEV VVAQQILQTM GLRAFTPMVT
ACPGCGRTTS TYFQALARDI QAHVQRRMPE WRRTYPGVEN LTLAVMGCVV NGPGESRNAD
IGISLPGTGE RPVAPVYVDG EKTVTLKGER IAEEFQAIVE DYIEDRFGQQ RAGDR
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