Gene Mlg_1333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlg_1333 
Symbol 
ID4270006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlkalilimnicola ehrlichii MLHE-1 
KingdomBacteria 
Replicon accessionNC_008340 
Strand
Start bp1532982 
End bp1533362 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content66% 
IMG OID638126086 
Productsuccinate dehydrogenase subunit D 
Protein accessionYP_742172 
Protein GI114320489 
COG category[C] Energy production and conversion 
COG ID[COG2142] Succinate dehydrogenase, hydrophobic anchor subunit 
TIGRFAM ID[TIGR02968] succinate dehydrogenase, hydrophobic membrane anchor protein 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.934114 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTGA GGACGAATAT CAAAGAGGCG CAGGGCCTGG GCTCTGCCAA GGACGGGGTC 
AGCCATTGGT GGCTGCAACG GCTCACCGCC GTGGCCCTGG TTCCCCTCAT GCTCTGGCTG
GCCTTCGGGC TTGCCCGCCA CGGCGGGGCC GGCTATGAGG CCACCGTGGC CTGGGTCGCC
AACCCGATGA CCACGGTGCT CTGGGTGCTG TCCCTGGCGG CGCTGTTCTG GCACATCAAG
CTGGGCCTGC AGGTGGTCAT TGAGGACTAC GTGCACGACG AGAGAGCCAA GTTCGCGAGC
CTGATCGCGA TGAAATTCAT CACCGTGCTG CTGGCCGCCA TCGCCATCCT GGCGGTGCTG
CGTGTCGCGC TGGGGAGCTG A
 
Protein sequence
MNLRTNIKEA QGLGSAKDGV SHWWLQRLTA VALVPLMLWL AFGLARHGGA GYEATVAWVA 
NPMTTVLWVL SLAALFWHIK LGLQVVIEDY VHDERAKFAS LIAMKFITVL LAAIAILAVL
RVALGS