| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1234 |
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| Symbol | |
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| ID | 4269018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | + |
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| Start bp | 1439177 |
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| End bp | 1439962 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638125984 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_742073 |
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| Protein GI | 114320390 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.512181 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.233712 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTATC GATTTGCCTT AGGCCTGGAA TACGACGGCA GCGGCTTTTG CGGCTGGCAG
CGCCAGGACC ACGCGCCTTC GGTCCAGGCG GCGCTGGAGG CAGCGCTGTC GCGGGTCGCC
GACGAGCCGG TGACTGTCAC CTGCGCTGGA CGCACGGACA CCGGCGTGCA CGCCACCGGC
CAGGTGGTGC ACTTCGAGAC CGGTGCCTAC CGGCCGGAAC ACGCCTGGGT GTTGGGGGCC
AACGCCAACC TGCCCGACAC GGTCTCGGTG CATTGGGTGC AACCGGTGAG CGAGGCCTTC
CACGCCCGCT TCGGTGCGCT CCGCCGGAGC TATCGCTATG TCTGGTACTG CAGCCGCTCC
CGGCCGGCCC TGTTGCGGGG GCGTGTGGCC TGGTCGAAGT ACGCGCTGGA TCCGGAACCC
ATGGCGATGG CGGCGGGGCA CCTGTTGGGC CGGCACGATT TCTCCGCCTT CCGGGCCGTG
GCCTGTCAGG CCAAACACCC GGTGCGCGAG CTCTATCGCC TCGATGTGTG GGCCCGGGGT
GGGTTTGTCT ACCTGGATGT GTGCGCCAAC GCCTTCCTCC ATCACATGGT CCGAAACCTC
GCCGGTACCC TGGCCCTGAT CGGCCGGGGG GAACGGCCTG CGACTTGGGC CGCGGACCTG
CTGGCCGGGG GCGACCGGAC CCGGGCCGGG GCCACCGCGC CGGCCGAGGG CCTATACCTC
GTTGGCGTGG ACTATCCGGA GGCGTTCTCG CTGCCGCCAC ACGGCTGGTG GCCGCGCTTT
GCCTGA
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| Protein sequence | MSYRFALGLE YDGSGFCGWQ RQDHAPSVQA ALEAALSRVA DEPVTVTCAG RTDTGVHATG
QVVHFETGAY RPEHAWVLGA NANLPDTVSV HWVQPVSEAF HARFGALRRS YRYVWYCSRS
RPALLRGRVA WSKYALDPEP MAMAAGHLLG RHDFSAFRAV ACQAKHPVRE LYRLDVWARG
GFVYLDVCAN AFLHHMVRNL AGTLALIGRG ERPATWAADL LAGGDRTRAG ATAPAEGLYL
VGVDYPEAFS LPPHGWWPRF A
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