| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1215 |
|---|
| Symbol | |
|---|
| ID | 4269746 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | + |
|---|
| Start bp | 1417002 |
|---|
| End bp | 1418159 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638125965 |
|---|
| Product | queuine tRNA-ribosyltransferase |
|---|
| Protein accession | YP_742054 |
|---|
| Protein GI | 114320371 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
|---|
| TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.557932 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGATC AGCCACCGAT TGCTGAGCGT CTGGATTTTG CCCTCATCGC CGAGGACGGA
CTGGCCCGGC GCGGCCGGGT GACGCTGCCC CGGGGCGAGA TCGACACCCC GGCGTTCATG
CCGGTGGGCA CCTACGGCAC GGTAAAGGCG ATGACCCCGG AGGAGCTGCA GGCCATGGGG
GCTCAGATCA TCCTGGGCAA CACCTTCCAC CTGTGGTTGC GCCCCGGCAC AGGGATTATC
CGCGAGCACG GCGATCTGCA CGACTTCTGC CACTGGCAGG GCCCGATCCT CACCGACTCC
GGCGGCTTCC AGGTCTTCAG CCTGGGGGAG CTGCGCAAGA TCACCGAGGA CGGGGTCCAT
TTCCGCTCCC CGGTCGACGG CTCGAAGGTC TTCATGGGGC CGGAGGAGTC CATGGCGGTG
CAGCGCGAGT TGGGTTCGGA CATCGTCATG ATCTTCGACG AGTGCACCCC CTATCCGGCC
GACCTGGCGA CGGCGCGGCG CTCCATGGAA CTGTCGTTGC GCTGGGCGGC TCGCAGTAAG
CAGGCCCACG GCGACAACCC CGCGGCGCTG TTTGGTATCG TCCAGGGTGG GATGTACCCG
GAGCTTCGAC GCCAGTCCCT GGAGGGGCTG CAGGCGATCG GTTTCGACGG CTACGCCATC
GGCGGCCTCT CGGTGGGGGA GCCGCACGAG GAGCGGGTGG CGGTGCTGGA CAGCCTGGCG
CTGCAGCTTC CGCAGGACCG ACCGCGGTAC CTGATGGGGG TCGGCAAGCC GGAGGACATT
GTCGAGGCGG TCCGCCGGGG GGTGGATATG TTCGATTGCG TGATCCCCAC CCGCAACGCC
CGTACCGGGT TCCTCTACAC CCACGAGGGG CTGATCCGGT TGCGTAACGC CAGGCATGCC
CGTGATACCG GCCCGCTGGA TCCGCACTGT GACTGCTACA CCTGCCGCCA CTATTCCCGG
GCCTACCTGC GGCACCTGGA CAAGTGCAAC GAGATCCTCG GCGCCCGGCT GAACACCATT
CACAATCTGC ACTATTACCA GACGCTGATG CGCGGCCTGC GCGAGGCCAT TGCCGAAGGG
CGCCTGGGCG CCTTTATGGA GACCTTCTAT GCCTTGCGCG GGCAGGCGGT GCCGCCGGCC
CCGGCAGTGC CCCGCTGA
|
|---|
| Protein sequence | MSDQPPIAER LDFALIAEDG LARRGRVTLP RGEIDTPAFM PVGTYGTVKA MTPEELQAMG
AQIILGNTFH LWLRPGTGII REHGDLHDFC HWQGPILTDS GGFQVFSLGE LRKITEDGVH
FRSPVDGSKV FMGPEESMAV QRELGSDIVM IFDECTPYPA DLATARRSME LSLRWAARSK
QAHGDNPAAL FGIVQGGMYP ELRRQSLEGL QAIGFDGYAI GGLSVGEPHE ERVAVLDSLA
LQLPQDRPRY LMGVGKPEDI VEAVRRGVDM FDCVIPTRNA RTGFLYTHEG LIRLRNARHA
RDTGPLDPHC DCYTCRHYSR AYLRHLDKCN EILGARLNTI HNLHYYQTLM RGLREAIAEG
RLGAFMETFY ALRGQAVPPA PAVPR
|
|---|
| |