| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1156 |
|---|
| Symbol | |
|---|
| ID | 4270662 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | + |
|---|
| Start bp | 1354724 |
|---|
| End bp | 1356673 |
|---|
| Gene Length | 1950 bp |
|---|
| Protein Length | 649 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 638125905 |
|---|
| Product | helicase c2 |
|---|
| Protein accession | YP_741995 |
|---|
| Protein GI | 114320312 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG1199] Rad3-related DNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGACCGCCG GGGACGCCCC CTTGCCGGAG GTGGCCCTGG AGGTGCTGGG CGCCGACGGG
GCGCTGGCCG CGCGGATACT CGGCTTTCAA CCCCGGGAGG CTCAGCAGGG CATGGCCGCG
GCGGTCGCCG AGGCGCTGGC GGACAGCGCC ACGCTGGTGG TCGAGGCCGG TACCGGCACC
GGCAAGACCT TCGCCTACCT GGTGCCTGCG CTGCTCTCCG GTCGGCGGGT GGTGATCTCC
ACCGGTACCC GGACACTGCA GGACCAACTC TTCCACCGCG ACCTGCCCCT GGTGCGCGAC
GCCCTGGGTG TCCCATTGCG TGCCGCGCTG CTCAAAGGGC GGGGCAATTA CCTCTGCCTG
CAGCGGTTGG GCGCAGCGCG CGAGGGGACG CCGGGGCTGA GCACGGCACA GCAGGATGCC
TTGGAGCAGG TGGCGGGGTG GGCGGCCACC ACCGACTCCG GTGACCTGGC CGAGGCGCCG
CCGGCCGCCC GGCGCCCCGA TGTGCGCCCC CGAATCACCG CGACCGCCGA GAACTGCCTG
GGCGGACAGT GCCCCCGCTT TTCCGAATGC CACTTCTACG AGGCCCGGCG CCGGGCGCAG
GAGGCCGACC TGGTGGTGAT CAACCACCAC CTGCTGCTGG CGGACTGGGC CCTGCGTGAA
TCGGGCTGGG GCGAGGTGGT GCCGGAGGCG GAGGCCTGGA TCCTGGACGA GGCCCACCAG
CTGCCGGAGA CGGCGGCGCG TTTTTTCGGC CTGGGCCTCA GCGCCCGACA ACTGCGGGAC
CTGGCCCGGG ACTGCCTGGA GGACTACGGG CGCGAGGCCG GGGATCAGCC CGGTTTTCCG
GAGCGGGTGG CCGCGGTGAC CGCCGCTGCC GATTCGCTGC GCGACGCACT CGGTGAGGGC
GATCAGCGGG CCGCCTGGCC GCAGCCCCCC GCTGCGGAGC TGCGCCGGGC GGTGACCGCA
CTCAAGGGGG CACTGCACGA CCTGGCCCTG GCCCTGGCGC CGCTCTCCGA GCGCGGGCTT
GGCCTGGCCC GGTGCCAGCA ACGGGCGGAG GCGCTCCACC AGGCACTGTG TCGCTTCAAT
GAGCCCGGGA GCGGTGATGG GGTGCCCTGG TTCGAGACCC AGGGCTCGGG GTTCTGGTTG
CGGCTCACGC CGCTGGATGT CTCCGGTCCC TTCCGCAACC GCCGTGCCGC GGCCCCCGCC
GCCTGGGTCT TCACCTCCGC CACCCTGGCC ATGAAGGGCG ATTTCTCCCA TTTCGCCGAT
CGTCTGGGCC TGGAGGCACC GCGCACCCTC TGTCTGGACA GCCCCTTCGA CTACGCCCGG
CGGGCGCTGC TCTACCTGCC CGACAATCTC CCCGACCCGG ACGCACCGGA TTATGCCGAG
CGTCTGGTGG CGATGGCGCG GCCGGTGATC ACCGCGGCCC CGGGCGGGGC CTTCCTGCTG
TTCACCAGCT ACCGGGTGCT GCGCCGGGCC GCCGAGTCCC TTGCCGGCAC CCTGGACCGC
CCGCTGCTGG TCCAGGGGGC GGCGGCCCAG CACGAGCTGC TGGCCCGGTT CCGACGGGCC
GGGGACGCCG TGCTGCTGGG CACAGCCAGC TTTTGGGAGG GGGTGGATGT GCGCGGCGCC
GCGCTCTCGA CCCTGATCAT CGACCGGCTG CCTTTCGCCT CACCCGCCGA CCCGGTGCTG
CAGGCCCGGA TTCAGGCGGC GGAGGCCGAG GGGATTTCCG CCTTCCGCCA CCTGCAGTTG
CCGCATGCGG TGATTACACT GAAGCAAGGG GTGGGGCGGC TGATTCGCGA TGCGGATGAC
TGCGGTGTGC TGGTGATCGC CGATCCGCGG CTCACCCGCC GGGGCTACGG GAAGGTCTTC
CTGCGGAGTC TGCCGCCCAT GAGGCGCACC GGGTCGCTGG AGGAGGTGCA GGCCTTCTGG
CAGGAGGGGC GAGATGAAGT TTCTGGATGA
|
|---|
| Protein sequence | MTAGDAPLPE VALEVLGADG ALAARILGFQ PREAQQGMAA AVAEALADSA TLVVEAGTGT
GKTFAYLVPA LLSGRRVVIS TGTRTLQDQL FHRDLPLVRD ALGVPLRAAL LKGRGNYLCL
QRLGAAREGT PGLSTAQQDA LEQVAGWAAT TDSGDLAEAP PAARRPDVRP RITATAENCL
GGQCPRFSEC HFYEARRRAQ EADLVVINHH LLLADWALRE SGWGEVVPEA EAWILDEAHQ
LPETAARFFG LGLSARQLRD LARDCLEDYG REAGDQPGFP ERVAAVTAAA DSLRDALGEG
DQRAAWPQPP AAELRRAVTA LKGALHDLAL ALAPLSERGL GLARCQQRAE ALHQALCRFN
EPGSGDGVPW FETQGSGFWL RLTPLDVSGP FRNRRAAAPA AWVFTSATLA MKGDFSHFAD
RLGLEAPRTL CLDSPFDYAR RALLYLPDNL PDPDAPDYAE RLVAMARPVI TAAPGGAFLL
FTSYRVLRRA AESLAGTLDR PLLVQGAAAQ HELLARFRRA GDAVLLGTAS FWEGVDVRGA
ALSTLIIDRL PFASPADPVL QARIQAAEAE GISAFRHLQL PHAVITLKQG VGRLIRDADD
CGVLVIADPR LTRRGYGKVF LRSLPPMRRT GSLEEVQAFW QEGRDEVSG
|
|---|
| |