| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1116 |
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| Symbol | |
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| ID | 4269840 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | + |
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| Start bp | 1305923 |
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| End bp | 1307407 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638125868 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_741958 |
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| Protein GI | 114320275 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.464201 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTCA AGGATAGTGA GACCCCGCGG CCGCGCCAGC ACCCCGAGGC CATTCGGGAG
CAGGGGACAG CTCCCCAGGT GATCGACGGC GCCTTCCCTG ACCGGGAGAT GGTGGCACGG
GCCGCGACCA ATGGACTCTA TCATGGGCGA GGGCCACTGG TGAGCGGGCG AGCGCTTACG
CCAGTGGCCA CACCGGTGGC GGCCGATCCG GTGTCGATCC TCCTCCTGGG CCTTGATCCC
GCAACGGCGG CCAGGGTCAT GGCGGTGGTC GCCACTCACT TCGGCCAGCC CTTCGACATG
GTATCGCGTG CCATTGATGC AAGGGCGATC CGTGCCGCGG ACATCGTGCT CTTCGACGTG
GCCGTTCCGG ACTACGCGAT CAGTCAGGCA CAACTCGCTG CCCCCGAGGC ACTGATCCTG
CCGTTGGACG GGGGCCGGCT GGAAGGGGAT AGCTGGCTTC CCGCCATCCT CCGCCACGTC
GCCCGGCAAA AGGCCGTGGA ATCGGGCCGG CAGGTGGCGG AGGAGGCGTT GTTCCAGAAA
GCGGAGCGTG CCCGTGTCAC CCTGGAATCC ATCGGCGACG CCGTGCTGGT GACGGACAGC
CTGGGCTATG TGACGTATCT CAACCCGGTG GCGGAAACCC TCACCGGCTG GTCGCGGGAC
GAGGCCTCCG CCCAGCCTCT GGCGACCGTC TTCAAGATCG TGGACGGGGC CGCCGGCGAG
TTCGCGCTGA ACCCTGCGGT TACTGCGATG AACGAAGACA GAACCGTCGG GCTGGTGGCC
AATTGCATCC TGCTGCAACG CGATGGCGGC AGCATCGGCA TCGAGGACTC CGCGGCACCG
ATCCATGATC GTAACGGCCG GGTCACCGGT GCGGTCATCG TCTTTCGCGA TGTCAGTCTG
TCGCGCTCGG TGACCCAGAA GATGGCCTAT CTGGCTCACC ATGACAGCCT GACCGGGTTG
CCCAACCGAG CGCTGCTCGC GGAACGGCTT GGCCGGGCCC TGGGGGCCGC CCGCCGCCAT
GACCGGCAAC TCGCCCTGCT GTTTCTGGAT CTGGATCACT TCAAGCGCAT CAACGACACC
ATGGGCCATG ATATCGGCGA CCACGCCCTC CGCGGGACCG CCTATCGGCT TTCGGACTGT
GTCCGCGAGA CCGATACCGT GAGCCGTCTC GGGGGTGACG AATTCGTGGT TCTGCTCGAG
GAGATCGATA GCCCGGACGA TGCGGCGCAC ATCGCGGAAA AAGTGCTGGC GGCCATCACG
GCGCCGCTGC ATGTGGGTGA CCACACCCTG CAGGTCTCCG CCAGCATCGG CATCAGTATC
TTTCCCCAAC ACGGTGCGGA TGCCGAGACC CTCCACCAAC GGGCCGATGC CGCCATGTAC
CAGGCAAAGG CAAAGGGCCG GGCGGGCTAC CAATTCTTCC AGGCCGATCC GGAGGGTGAA
GCGGGAGTGC CGCATTCCGG CAATTCGACA AAGCGCGTAG GATAA
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| Protein sequence | MKFKDSETPR PRQHPEAIRE QGTAPQVIDG AFPDREMVAR AATNGLYHGR GPLVSGRALT
PVATPVAADP VSILLLGLDP ATAARVMAVV ATHFGQPFDM VSRAIDARAI RAADIVLFDV
AVPDYAISQA QLAAPEALIL PLDGGRLEGD SWLPAILRHV ARQKAVESGR QVAEEALFQK
AERARVTLES IGDAVLVTDS LGYVTYLNPV AETLTGWSRD EASAQPLATV FKIVDGAAGE
FALNPAVTAM NEDRTVGLVA NCILLQRDGG SIGIEDSAAP IHDRNGRVTG AVIVFRDVSL
SRSVTQKMAY LAHHDSLTGL PNRALLAERL GRALGAARRH DRQLALLFLD LDHFKRINDT
MGHDIGDHAL RGTAYRLSDC VRETDTVSRL GGDEFVVLLE EIDSPDDAAH IAEKVLAAIT
APLHVGDHTL QVSASIGISI FPQHGADAET LHQRADAAMY QAKAKGRAGY QFFQADPEGE
AGVPHSGNST KRVG
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