Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mlg_0945 |
Symbol | |
ID | 4269679 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alkalilimnicola ehrlichii MLHE-1 |
Kingdom | Bacteria |
Replicon accession | NC_008340 |
Strand | - |
Start bp | 1070393 |
End bp | 1071313 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638125697 |
Product | farnesyl-diphosphate synthase |
Protein accession | YP_741789 |
Protein GI | 114320106 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAAGC CTTCGAAGAT CCGGCACATC GCGACACTTG AACGTGTCAG CCCCACCTGG CGTGCCCGGG TGGAGCAGGC GCTGGACTAC TGGTTGCCGG AGGCGCAGAC CCACCCCGCG CGCCTGCACC AGGCCATGCG CTATTCCGCG TTGTCCGGCG GCAAGCGGCT GCGCCCGATA CTGGTTTTTG CCACCGGGCA GGCCCTGGGC GCGGCCCCCA CCCTGCTGGA CGGCCCCGCC TGCGCGGTGG AGTGCATCCA CGCCTACTCG CTCATCCACG ACGACCTGCC GGCCATGGAC GACGACGAGC TGCGCCGGGG TCAGCCCACC TGTCACAAGG CCTTCGACGA GGCCACCGCC ATTTTGGCCG GGGACGCGCT GCAGACGCTG GCCTTTCACA TCCTGGCCCA CGACCCGGGG GGGGTGCAGA ACAGCCGCGC CCGGCTGCGG ATGGTCGAGG TGCTGGCGCT GGCCGCCGGC TCCCGCGGTA TGGCGGGGGG GCAGGCCATC GACCTGGCCG CCACCGGGCA GCAACTGGAC GTGGCCCAGC TCGAGGATAT GCACATCCAC AAGACGGGCG CCCTGATCCG GGCCAGCGTG CAGCTCGGCG CCCTGGCCGC CAGCCCGGTG GACGAGGAGC TGCTCCAGCG GCTGGACCAT TACGGCAAGT GCATCGGGCT CGCCTTCCAG ATCCGCGACG ACATCCTGGA TGTGGAGGGC GAGACCGAGG CCTTGGGCAA GGCCCGGGGC TCGGACCAGC GCCAGGCCAA GGCCACCTAC CCCGCCCTGC TGGGCATGCG CGAGGCCCGC GAGACGGCTG ACCGGCTGGT GGAGGACGCC CTGGAGTCGC TGGAGGGGCT GGACCAGAGC GCCGATGTGC TACGCGGCAT TGCCGAATAC TGCATTGGCC GGAACCACTG A
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Protein sequence | MNKPSKIRHI ATLERVSPTW RARVEQALDY WLPEAQTHPA RLHQAMRYSA LSGGKRLRPI LVFATGQALG AAPTLLDGPA CAVECIHAYS LIHDDLPAMD DDELRRGQPT CHKAFDEATA ILAGDALQTL AFHILAHDPG GVQNSRARLR MVEVLALAAG SRGMAGGQAI DLAATGQQLD VAQLEDMHIH KTGALIRASV QLGALAASPV DEELLQRLDH YGKCIGLAFQ IRDDILDVEG ETEALGKARG SDQRQAKATY PALLGMREAR ETADRLVEDA LESLEGLDQS ADVLRGIAEY CIGRNH
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