Gene Mlg_0905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlg_0905 
Symbol 
ID4269049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlkalilimnicola ehrlichii MLHE-1 
KingdomBacteria 
Replicon accessionNC_008340 
Strand
Start bp1023465 
End bp1024223 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content71% 
IMG OID638125657 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_741749 
Protein GI114320066 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00434929 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAATC CACTGACCGG CGACTATACC CCGGCGGCTG AGCTGTTCCG GGACCGCATC 
ATCCTGGTGA CCGGGGCCTG TGGGGGGATC GGCGGGGCGG TCTGCCGCCA GCTGGCCGAG
GCCGGGGCCA CCGTGGTCGC CCTGGACAAG GACATGAAGT CACTGGAGCG CCTGTACGAT
GACCTGGCCC AGCGCGGCCC GGCGGAACCG GCGCTCTACC CGATGAACCT GGAGGGCGCC
AGCACGGCGG ACTACGACGA CATGCGCGTG CGCCTGGAGG AGAACTTCGG GCGGCTCGAT
GGTCTGCTGC ACTGCGCCGC GATGCTCGGC CGTCCGGCGC CGGTGGAGAT CTACGACATG
GAAGCCTGGT TCCGGACCGT CCACCTCAAT CTCCACGCCC CCTTCCTGGT CACCCGGGCC
TGCCTGCCGC TGCTGCGCCA ATCGCCGGCC GCCTCCATCG TCTTCACCAG CGCCCGTGAG
GGCCGGGAAC AGATGCCCTA TGCCGGCGCC TACGGCGTCT CGGCGGCCGG AGTGGAAGGT
CTGATGCGCA TCCTCGCCGC CGAGCTCGCC GACACCACCC CGGTGCGGGT CAACAGCCTG
GACCCGGGTG CGGTGCGCAC CCGAATGCGC TATCAGGCCT ACCCGGGCGA GGACCAGGAG
AAGCTGCCCA CCCCCGACCA GGTAGCCGGG GCCTTCGTCT GGCTGCTGGG CGCGGACAGT
GCCGACGTCC ACGGCCAGTC CCTCACCCTG GCGCGCTGA
 
Protein sequence
MSNPLTGDYT PAAELFRDRI ILVTGACGGI GGAVCRQLAE AGATVVALDK DMKSLERLYD 
DLAQRGPAEP ALYPMNLEGA STADYDDMRV RLEENFGRLD GLLHCAAMLG RPAPVEIYDM
EAWFRTVHLN LHAPFLVTRA CLPLLRQSPA ASIVFTSARE GREQMPYAGA YGVSAAGVEG
LMRILAAELA DTTPVRVNSL DPGAVRTRMR YQAYPGEDQE KLPTPDQVAG AFVWLLGADS
ADVHGQSLTL AR