Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mlg_0905 |
Symbol | |
ID | 4269049 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alkalilimnicola ehrlichii MLHE-1 |
Kingdom | Bacteria |
Replicon accession | NC_008340 |
Strand | - |
Start bp | 1023465 |
End bp | 1024223 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638125657 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_741749 |
Protein GI | 114320066 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00434929 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAATC CACTGACCGG CGACTATACC CCGGCGGCTG AGCTGTTCCG GGACCGCATC ATCCTGGTGA CCGGGGCCTG TGGGGGGATC GGCGGGGCGG TCTGCCGCCA GCTGGCCGAG GCCGGGGCCA CCGTGGTCGC CCTGGACAAG GACATGAAGT CACTGGAGCG CCTGTACGAT GACCTGGCCC AGCGCGGCCC GGCGGAACCG GCGCTCTACC CGATGAACCT GGAGGGCGCC AGCACGGCGG ACTACGACGA CATGCGCGTG CGCCTGGAGG AGAACTTCGG GCGGCTCGAT GGTCTGCTGC ACTGCGCCGC GATGCTCGGC CGTCCGGCGC CGGTGGAGAT CTACGACATG GAAGCCTGGT TCCGGACCGT CCACCTCAAT CTCCACGCCC CCTTCCTGGT CACCCGGGCC TGCCTGCCGC TGCTGCGCCA ATCGCCGGCC GCCTCCATCG TCTTCACCAG CGCCCGTGAG GGCCGGGAAC AGATGCCCTA TGCCGGCGCC TACGGCGTCT CGGCGGCCGG AGTGGAAGGT CTGATGCGCA TCCTCGCCGC CGAGCTCGCC GACACCACCC CGGTGCGGGT CAACAGCCTG GACCCGGGTG CGGTGCGCAC CCGAATGCGC TATCAGGCCT ACCCGGGCGA GGACCAGGAG AAGCTGCCCA CCCCCGACCA GGTAGCCGGG GCCTTCGTCT GGCTGCTGGG CGCGGACAGT GCCGACGTCC ACGGCCAGTC CCTCACCCTG GCGCGCTGA
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Protein sequence | MSNPLTGDYT PAAELFRDRI ILVTGACGGI GGAVCRQLAE AGATVVALDK DMKSLERLYD DLAQRGPAEP ALYPMNLEGA STADYDDMRV RLEENFGRLD GLLHCAAMLG RPAPVEIYDM EAWFRTVHLN LHAPFLVTRA CLPLLRQSPA ASIVFTSARE GREQMPYAGA YGVSAAGVEG LMRILAAELA DTTPVRVNSL DPGAVRTRMR YQAYPGEDQE KLPTPDQVAG AFVWLLGADS ADVHGQSLTL AR
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