| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_0887 |
|---|
| Symbol | rplS |
|---|
| ID | 4269708 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | + |
|---|
| Start bp | 1006849 |
|---|
| End bp | 1007202 |
|---|
| Gene Length | 354 bp |
|---|
| Protein Length | 117 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 638125639 |
|---|
| Product | 50S ribosomal protein L19 |
|---|
| Protein accession | YP_741731 |
|---|
| Protein GI | 114320048 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0335] Ribosomal protein L19 |
|---|
| TIGRFAM ID | [TIGR01024] ribosomal protein L19, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00504476 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 58 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACATCA TCGAGCAGCT CGACAAGGAG CAGATGGCGG CCCGCGAGGC CAAGATTCCC
GAGTTCGGTC CCGGCGACAC CGTGACCGTC CAGGTCTGGG TGAAGGAAGG CGGTCGTGAG
CGTCTGCAGG CCTTCGAGGG CGTGGTGATT GCCAAGCGCA ACCGCGGCAT CAACAGTGCC
TTCACGGTGC GCAAGGTCTC CCATGGTGAG GGCGTCGAGC GCGTCTTCCA GACCTACAGC
CCGATCATCG AGAGCGTGAA GGTCAAGCGC CGGGGTGACG TGCGCCGCGC CAAGCTTTAC
TACCTGCGCG AGCGCAGCGG CAAGTCTGCC CGCATCAAGG AAAAGGTGAA GTAA
|
|---|
| Protein sequence | MNIIEQLDKE QMAAREAKIP EFGPGDTVTV QVWVKEGGRE RLQAFEGVVI AKRNRGINSA
FTVRKVSHGE GVERVFQTYS PIIESVKVKR RGDVRRAKLY YLRERSGKSA RIKEKVK
|
|---|
| |